NONHSAT007222
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT007222 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1142 nt |
Genomic location |
chr1-:162530017..162531098 |
Exon number |
1 |
Exons |
162530017..162531098 |
Genome context |
|
Sequence |
000001 GGGGTGCCAG GAGCCGGCCG GCAGAGAGCG GCTCGTGGGT CCCAGGACCA CTGACGTCCC TAGGTTGTAC TGGGAGGTGC 000080
000081 GAGCCCGAGG CTCTTAGTCG GCCCAGCGGC ACGGGGCACA AGCGGGCCAC AGAGATGGGC AGGGAGCTGT GTCCCCAGGG 000160 000161 TGGCGGATTT CCGAGCCACC CACGCGGTTG GTTGGGAAAG GGCGGTGGAT TTTCCTGCGG AGAAACTTTC AGGGCGGGCC 000240 000241 TGGCGCGCTC TCTGACCTTG GGCTAGTTAT TTTGTGTGCA GTTCACAAGA TGCCTGGCCG GGCTCCAAAC TCGCTCTCTG 000320 000321 TTTGGTTGTG TTTTGGCTCC CAAGAAGGCG AAGCCAGGCC TTTTTTCTTT TGCACAAACA GACAGGAAAG GAGAGAGGAA 000400 000401 ATGCAAGCAA AGGTAGTAGG TAACCTAAGG TAGTATAAGC CCGGGGTCAT CTTTGTGAGT TTGCAGACTT AACGTCGCTA 000480 000481 GGCCTCAGTA CTCTGCAGAA AGATGGTGGA GGACCTAGAT GACCTCCCAG GCCATTCCAG GACCAGCGTT TACAGTCCTG 000560 000561 TTACATAACC TAGTGTGGGT GTGCACACAC AGGTTATTAT ATGTTCAGCA CTGTGCCCTT GGAAGCTATG TTTACATTTA 000640 000641 AAGTTGTGTT GCATTTTGCA GCTTTTGCAA GAAGTGGAAT ATGTTGAAAT ACGAAAATAC CTAGATTTAA CATACCACCT 000720 000721 ATCATAAAGA GATTCAGGCG CCTTTCTTCT ACTTTCTTGG GTGCAAAGGC CTTTTCATTC CCTTTACCAA TTGCATAATC 000800 000801 ACCCACTGCC TCAAGTAACA ACAGAAAAAC TTAAACTTGG TAAGTAATGC TGGTAGATTT ACATTCAGGA GATTGAATAC 000880 000881 TCTCCATCTC TCATGATCCT AGAACTTCCT TCGTTTCTTT GAAAGAAGAA TAGTGTAGTG ATTGGTTTAT AGTGTAGTGA 000960 000961 TTGGTTTCTT AATCATGGGA TCTGAAGACA ATTTCAGCTT TATTGCTTGT GATCTTTGGC AAGCTACTTG TGCTATCAGT 001040 001041 TTTCTCATCT ATAAAAAACA GACAATAAAG ATGAAAATGC AATTTGGAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA 001120 001121 AAAAAGAAAA AAAAAAAAAA AA |
Predicted Small Protein
Name | NONHSAT007222_smProtein_134:265 |
Length | 44 |
Molecular weight | 4406.9847 |
Aromaticity | 0.093023255814 |
Instability index | 55.4720930233 |
Isoelectric point | 9.68426513672 |
Runs | 5 |
Runs residual | 0.0410243010191 |
Runs probability | 0.0137078254725 |
Amino acid sequence | MGRELCPQGGGFPSHPRGWLGKGGGFSCGETFRAGLARSLTLG |
Secondary structure | LLEEELLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHLLLL |
PRMN | - |
PiMo | - |