NONHSAT010559

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT010559

Source

NONCODE4.0

Same with

,

Classification

overlapping(AS),antisense

Length

1799 nt

Genomic location

chr1+:242147327..242277242

Exon number

12

Exons

242147327..242147451,242208335..242208444,242233308..242233425,242234983..242235083,242239946..242240017,242240622..242240845,242254891..242254994,242257161..242257359,242271352..242271480,242273348..242273474,242275153..242275216,242276817..242277242

Genome context

Sequence
000001 AACCTCTGCC TCCCGGGTTC AAGCAATTCT CCTGCCTCAG CCTCCTATAT AGCTGGGACT ACAGGCATGT GCCACCACAC 000080
000081 CTGGCTAATT TTCGTATTTT TAGTAGAGGC AGGGTTTCAC CATGTACAGG CTTCCCACTG GGGCATGGCC TAGTAGATCT 000160
000161 GTGAGGAGAG AATCACGGTC CTCCAGACCC CAGAATGGTA GATCTAGCTA CAGCTTGCAC CCTGCACCTA GAAAACCTGA 000240
000241 TTGTTCTACA TGAATTAACT TATCTGTCTC TTTCTCCTCT CACTCTTCTT TATGTTTTTT TTCTTAGTAC TCATTACTAC 000320
000321 CTGGTGTGTG TGTGTAGTTT TTTTTATAGA GATAGTGAAA TCAAGATCCT GAAGCATTGC TTCAAATAAT TTTAAGAGGA 000400
000401 GGTCAAACAC ACCTGTTCCA GTGAAATCTT CGAGACAAAA CATAGTCAAA GCAATCAGTG ATGGGGACAC AGCAAGCTAT 000480
000481 GACTGTCTCT GTCTCTGTGG GGCCTCTCCC CATGGAGACA CCACCCGGAT GGTCCTCACC CATTTTCTTT TCCAAAACAC 000560
000561 TCATATTTCA TTTCTTGCAT CTTAGCCACC CATGTATTCT TTACAATTCT GAGGTGCTAA AAAATTTTTT CAGGCCAAGC 000640
000641 ACGGTGGCTC ATGCCTATAA TCCCAGCACT TTGGGAGGCC GAGGTCGGGG GGGATCACTT GAGGTCAGGA GTTCAAAATC 000720
000721 AGCCTGGCCA ATATGGTGAA ACCCTGTCTC TGCTTCGATG TACTTTCACA CTAGAATGTC ATTACACCAA GAATGTTTTC 000800
000801 TTTAAATCGA TAGAATAATA AATTTTGTCA TGCTGTCAGC TCACTCACAC ATAGGACTTA TTCTATGAAA TATAGCTTTT 000880
000881 TTTTTCCTTC AAATTCAATG GATTGAGCCA AGATCCAGCA TCTTTACTGA TGCTCAAAAG CTTTAATTAG GCTCATCTCA 000960
000961 GGAATCATGG CTCTGGAAAG CTTTCCACAG GCCGATAAAG GAATTCCTGC ACCTTTGTGA TCATGCTCTT CTACCTTTCA 001040
001041 CTTCCTGACC GTCAGGAGGT TTCCTACCAC CAGGTCCTTG GGCTGTGTGG GCTGGGGTGA GGACAGGCTG ACTGCCTCCA 001120
001121 CAGGCCACCC TTACTACATC TCTGACGCTA CCTGGGCCTC AGTCCACTAA GAACTGATTA TCTATAATAT AGATATTATA 001200
001201 TTACTATATT ATATATTATT ATTATTATAT TATTATATTA TCATAAAGGC CATTAGAGAC CTTTAGAGGT GCAATGATCA 001280
001281 TGACACTGGC AGGCTACAGT TTCAAATAGG CTGAAATGGT AGATTATAAC CAAAATGCAA AATTTCAAGT GAGTCTCTGA 001360
001361 TTCTTTAACA TTCCCCTTTT CAGGTATATA CTTGTTAATA ATTTTCAAAT GATAATTTTT TTCATATAAT ATTTTATCTT 001440
001441 TTATCCTTTC AAATAATTTT CAAGTTGAGA GCAACCTAAT TTTCTTTTGA AAGTTACTCT CATTTCCATA ATGTAAACTA 001520
001521 CTGAGGTACT TCTGTAGGGT GAGACCATGA GCCTTCAAAA TGGACCCACT TTGGGAAAAG CTCCGTAATG AGTAAATTGC 001600
001601 CAATGCATGT TAAACAGCAA TGAATGGTGT GCTCTTCCTA AGGCAACCTG ATGGCATCTC CATTTCCAGG CTGGCTTCTC 001680
001681 CTGTGGTGCC CAGTTTAGTG CCTGGTCTTA GGGACTGGGT TCTAACCAGA GGCTGGGCAT TCACTGACCT TTTGGTGCTT 001760
001761 GTGCTGGAGA TAGGCAGGTA GTCCATGACA GCGATGTAC
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Predicted Small Protein

Name NONHSAT010559_smProtein_194:388
Length 65
Molecular weight 7533.9083
Aromaticity 0.15625
Instability index 40.77046875
Isoelectric point 6.37139892578
Runs 9
Runs residual 0.00796875
Runs probability 0.0444562209268
Amino acid sequence MVDLATACTLHLENLIVLHELTYLSLSPLTLLYVFFLSTHYYLVCVCSFFYRDSEIKILK
HCFK
Secondary structure LLLHHHHHHHHHHHHHHHHHHHHHLLLLLHHHHHHHHLLLEEEEEEEEEEEELHHHHHHH
HHLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLL
LLLL
PiMo ooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiii
iiii