NONHSAT011162
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT011162 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
703 nt |
Genomic location |
chr10-:5626954..5678087 |
Exon number |
3 |
Exons |
5626954..5627110,5677111..5677548,5677980..5678087 |
Genome context |
|
Sequence |
000001 TCCTCTGTAG GAAAGTGCTG GGTAAAATGC CTCTCACTGA TTGGCCTCGC TGCGCTGGTA TGGCTCCCTC CCTGGACAAT 000080
000081 GGTGCGTCTT CTAGGTCTGG CTCTGGGCCC TTTATTCGGA AAAACGAGCG TAAGACTGGC TCTGAGAACA AAGCTGGACA 000160 000161 GCTTGCTCAT CTTTCGAGCA GCTGTGCCGT GGAGAGATGA AGGTGGGGCG CACAGGGCCC TGGCAGGGGC TGTGCCCCCT 000240 000241 GTAATGGCTG AGAAAATATT TCCAGACCCT GGAGTCTTTG CCTTTTCTCT TTTCTCCACA TTAGCACCAC ATGACAGTGA 000320 000321 CAGCGAGGCC TCAGTGATTT TGGCTTGAAG GTCTTGTGAT CTCCGACAAG TTGAATGAAA AGATGTCTTA AATTGGTCCA 000400 000401 ATCTAAAGAG TGCCTCCTTT TTCTCCAAAC CATGAAAAAA GGCAGAAAAG ATGGATGATA GGCCTCTCTG CCTGTCTCTG 000480 000481 TCTCTCTCTC TCTCACGCAC CTGTGTACAC ATTTATTCGT TCAAATACAA TTTCACTCTA GCATCTAGGC AAAAACAACT 000560 000561 CATCAACCTT TTGAAAGCAA CAGCTGAGTC ACTAATACCA TTAGCAACCA GAATTTGCAC TTTCGGTGTG CCGGCATTCT 000640 000641 TCTGAGTGTT TTACCTAGAG TCACTGACTC AATTCTCACT GAAACCCTAG GAGGGAGGCA GTG |
Predicted Small Protein
Name | NONHSAT011162_smProtein_26:199 |
Length | 58 |
Molecular weight | 6018.6738 |
Aromaticity | 0.0350877192982 |
Instability index | 55.8842105263 |
Isoelectric point | 9.38031005859 |
Runs | 8 |
Runs residual | 0.0135964912281 |
Runs probability | 0.0140324147677 |
Amino acid sequence | MPLTDWPRCAGMAPSLDNGASSRSGSGPFIRKNERKTGSENKAGQLAHLSSSCAVER |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLLLLLLEEELLLLLLLLLLHHHHEEELLLLEEEEL |
PRMN | - |
PiMo | - |