NONHSAT012820
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT012820 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
399 nt |
Genomic location |
chr10-:38680896..38691746 |
Exon number |
2 |
Exons |
38680896..38681045,38691498..38691746 |
Genome context |
|
Sequence |
000001 GCTGGCAGTT CTGTGTCGCT AGGCTTCGGC CCGGCCGCCG CCACACATAA GCTGCGATGA GGAGCTTTAC GACTTCCCGG 000080
000081 TCTTCGGGGC CGGGCGCAGC AAGGGCCAGA CTCTGCGCTA GCAGGCGCTG CGCGCCAACC GGCCGGCACC TGTCGCAGAA 000160 000161 GGTGCAACCG ATCGCACTGT CGCGCAGAAG CTCCTCAATG GCCAGCACCA GCTGCAGCCC CGGCCGCCCA CTCGCCTCAC 000240 000241 TTGAGCCTGC TGGCAGCCTG CTATCAATTA TATTGATAGT AAATTTGAGG ACTACCTAAA TGCAGAATCG CGAGTGAACA 000320 000321 GATGTCAGAT GCCTGGTAAC AGGGTGCAGT GTTGTTTATA CTTCATTGCT CCTTCAGGAC ATGGGTCAGT AACCTGATA |
Predicted Small Protein
Name | NONHSAT012820_smProtein_56:298 |
Length | 81 |
Molecular weight | 8396.6589 |
Aromaticity | 0.0125 |
Instability index | 82.7075 |
Isoelectric point | 12.080871582 |
Runs | 9 |
Runs residual | 0.0263157894737 |
Runs probability | 0.0454964768691 |
Amino acid sequence | MRSFTTSRSSGPGAARARLCASRRCAPTGRHLSQKVQPIALSRRSSSMASTSCSPGRPLA SLEPAGSLLSIILIVNLRTT |
Secondary structure | LLLEELLLLLLHHHHHHHHHHHLLLLLLLLLLLLLLLEEEEELLLLLLLLLLLLLLLLLL LLLLLLLLEEEEEEEELLLL |
PRMN | - |
PiMo | - |