NONHSAT012855

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT012855

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1714 nt

Genomic location

chr10+:42686975..42689514

Exon number

2

Exons

42686975..42687136,42687963..42689514

Genome context

Sequence
000001 AATATAAGCC TCTGGACCTC ACTAAGTCAG GGCATGTCCC TGCTTGCACT ATGCATGACA CTTACCTCTT TTACTCTTTA 000080
000081 GCAATGAGGG AATGTCATCC TTACCCAGAT GCCAGCCACC CGTCTCACAT CCAGGACAGA GAGTCTCCAT CTCCTCTCCA 000160
000161 GCTACAGGTT TTATATAGCA AAAGAACCAT TTAAAGACTT GGGTTACAAA TGTATTTTAT TTTACCTCTG GCATGCCTTG 000240
000241 GCCTGAGAAA GCATTATATG GTGGCACAAT ATTTGTAACA TTCTCATCGC CATCTGGTGG TGGTTCGAGG TATGACGTTT 000320
000321 TGAAAATCTA GCAAGAATTA AAATATGTCA AGTTAGAAAG AAAAATTCCA GATTATTATT AAGATATAAT TCATTTTGCC 000400
000401 CCAAGTATAT ACTTCAGACT AAGCATCCTG GAACTAGGTT CTATAATTAA ATAGATAAAT TACACTGACA ACAATGAGAA 000480
000481 AGAGCCTTAT CATTATTATT GTCTTCCTAA TAATAGAAAC TTTTATAAAT GCATGCAATC CCAGGTAACC AAAAGTTTCC 000560
000561 TTATAAAGTG TAACAGCGGA GCCTCAAAGG TGGCACTTTG GCAAGCCTCT TTTTTTGACT ATGGCTTTTC AGCTTCCTTT 000640
000641 GTGGGCTCCT TTTCTTTCAT CTTTATTTAA ATAATATTTC CTTATGTTTT ATCCCCAGCC CGTTGCTTGC CTCTGTACTG 000720
000721 CCTCCCTGCG AGACTTCATT AAGTATCAGA ATTTTACCCA TAGCTCATAT GCTTATGATG CTTACCTTTT CAGATTCGTA 000800
000801 TATTTAAATG TTTTGTGGTT ATTTCATTCT GGATGTCCTA ACTCAACATG TCTCACCCCG GGCCTGCTTT TGGTCTGCAT 000880
000881 TTCCTACCTC TATTAATAGC TTCAGTCATT AGCCACGGAC ACCAGACAGT CTCGGAGTCA TCCTGAACTC TGTCTTCCCC 000960
000961 TCCTTCCCCA AGTCAATCAC TAATCAAGTC CTGCTAATAC ATTACCTTAC TATTTCTGAA ATCCATCCCT CTTCCTCATT 001040
001041 CCTACTAACA TCCTAATTTA AAACTTTATT ATCTTTTACC TGGACTATTG TCTTAAGACA ACAACTTTAA TCCGTTGCTT 001120
001121 AGCCTAGGTG TAATCCACAG AGGATCTTGT CTGTCTAAAA TGCCCCTCTA GCCACATCCT TCGCCTGCTC AGATCTTGTC 001200
001201 ATTGGCTCCC ATGAACTGAA GTTGAAGTTT AAGCTCCTTA GGACAGCATA CACGCGCTTC TATGATCTGT TCCCAGAACA 001280
001281 TATTTACTGG TTTATTTCAT ATCATGGCCC ACTTTGTATT TTACACTTTT GAAATACAGA CAATCATTAC ATTCTCCCAA 001360
001361 TAGTACTAAG CTAGTGTATG CCTAAAAGCC TTTGCCAATA TTTTATCTTT TGTTGAGAAT TCTCTTAGCT TATTTTGTCA 001440
001441 CGTGGTTAAC TCCTTATGTC CTTTCATGAC TCACAAGTCA AGACTTCAGG AAACCTTCTC TAACTCCCAG GCTGGGCTGA 001520
001521 GTGACCCTTT TCTGGGTAAA TAATGAACTC TAATCATACT CTTCATAGCA CTTACCATAC TAATTTGAAG TCTGAAGTAT 001600
001601 TCCATTGTCT GCCTCACTTT ACTTAGGCAA AGGAACCATG TCCTAGTCTC ATTCTGGCCT CAGGAGTTCA GCCTGGGTGA 001680
001681 CAGTGGGAGA CTGTGTGTCA AAAAAAAAAA AAAT
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Predicted Small Protein

Name NONHSAT012855_smProtein_683:895
Length 71
Molecular weight 8164.4546
Aromaticity 0.214285714286
Instability index 55.6201428571
Isoelectric point 7.62139892578
Runs 7
Runs residual 0.0448373408769
Runs probability 0.0609559138971
Amino acid sequence MFYPQPVACLCTASLRDFIKYQNFTHSSYAYDAYLFRFVYLNVLWLFHSGCPNSTCLTPG
LLLVCISYLY
Secondary structure LLLLLLLLHHHHHHHHHHHHHHLLLLLHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLL
EEEEEEEEEL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLHHHHHHHH
HHHHHHHHHH
PiMo iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTooooTTTTTTTT
TTTTTTTTTT