NONHSAT012944

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT012944

Source

NONCODE4.0

Same with

,

Classification

antisense

Length

1974 nt

Genomic location

chr10+:43674865..43710887

Exon number

5

Exons

43674865..43675814,43677333..43677381,43682611..43682793,43689644..43689866,43710319..43710887

Genome context

Sequence
000001 ATTGACATGG CTGGACTATT TTAACAAATT ATTTCTTCCT CCTTCCCCGA CCTTTTGGCA ATATGAAGCC TCTGCTGTTG 000080
000081 CTCCTCAGGG CCTGTGCAGT TATCCTAGGA TGGCATTGGA TTTAGCAGGG CTCTCTTTAT CTCTTTCCAT GCCTCCATTG 000160
000161 GTATCACTCC TATTAGACTC CACTGACTGT TCACTAATTG CTGTCTTGTT TTTGACAATG CTCTGGGGCA TAAATTGCTC 000240
000241 CATAATCTGT CCCTACTAAA TTGGGCCCTT TTGCAGGGAT AGTTTTTGCA GCAAGTCTTT GAGATTTGTT CAGACCCCAG 000320
000321 GAGGTATATT CTTACTATCT CTCTCTGTGG TTCTCTCTAG TAAATTAGCT GGCCTACAGT TTAGCTGTTG CCCTCCTGGA 000400
000401 GTTACCAGCC TCCTCTTAAT TGCTTACTAC CAAAATCTCC ATTATTTTCA AGAGGCTGGA ACTTCTCTAA ACTCTGAACT 000480
000481 TCTCTACATT CTATTTTAAA TAAAGTCAGT TCCTTAGGGA AGAACTTTGG AGCACTTTGT TCTTATGGAC TTCCTCTCCC 000560
000561 CCGGGGGAAA AAATCCATGA GGTTTTGCCC TGAGGATGGG GACAGTGACA CACTTATTAA GCAGAGTGAC CACCTCTGCC 000640
000641 CTATGAGCAG GACACTGGGT AGGGGCAGGA GGACCCCCAG TATTCTCAGC TGGCCACACC TGGAAGTGGA GCCTCCACCC 000720
000721 TGTTGCTGTG GGCTGGGTGA AAAAGAGCTG CACCTGTTTA GAACTTAGAC TCTTTATTTG GAGCTTCTGT TCCCTTGTTT 000800
000801 CCTTTCTTCC TGGTATTCCC ATTATACATA TGTTACATCT TTTGTAGTTG TCCCACCGTT CTTAGATATT TTGTTCATTT 000880
000881 TATTTTCAGT CTTTTTTTTT CTTTGATTTT CTGTTTTGGA AATTTTTATT GTCATATCCT CAAGCTCAGA TTACGAAGAT 000960
000961 GACGGGATTA AGAGATTAAA GTAAAGACAG GCAATCACAG CCTTCTTATC TTAGTAGTAT GCATTTAAGT TTCTTCCATG 001040
001041 CCTTTTTATG GCTTGAGAGC TCATTTCTTT TTAGTAATGA ATAATATTTC ATTGTCTGGA TGTAACCACA GTTTACCCAT 001120
001121 TCACCTACTG AAGGGTATCT TGGTTGCTTC CAAATGTTGG CAATTATTAA TAAAACTGCA ATTAACACAG TCCATACAGC 001200
001201 CTGGCTTAAC TAGGTATCCT GAACTTACTT ACTTATGTGA CCATGCAATA CAGCAGCCAG TGACATCTTT TTGGAGCTCA 001280
001281 CAATGAGGAA AGCAGGACTG AACGTGCCTC CTATAGCTTC TTTCGAGTCT CACCTTATTC AGTGGAAAGC CCTTTGTCAC 001360
001361 ACAAAGTGTT GCCAGCTGGA GACAAAAGTC TCTTGCCCAG TCCCTCCAGG GAGACAGCCC GGAGAGGCCC GTTTCTCAGA 001440
001441 TGGGGACACT GAGGCTCAGC TCACAGGACC CAAGAGGCCG TAATGTGCAG GACTGCCCAG GTCTGCCCTG CTGTTCCTCG 001520
001521 GACCTCAGCA TTGCCCCTGA GAGCACCTGG CAGGGGCATG GCCCCCTGAG CATCAAGTGC AGGCTGAAGC CCTGGCCTGG 001600
001601 ACATGTGGAC AAGCACACAT TCCCACGACC TGCAGATGAT TCGGGGGACC GATGAGCTCC CAGAAGCTCA TCTGTGGACT 001680
001681 TCAAATTAAG AAACCCAGCT TCCTGGAAAA CTGGGACAAA AACAGCCCTC AGGGCCCATC ATGCATGAGT CCCAGGGATC 001760
001761 TGCCAGGAGG TGGAGGAGGG GTTCGAGCCA GCCCCCTGCC TCTGCCAGCC TTGGCAGGGG GCTTCTTTCT GAGGCAGCAC 001840
001841 GTGGGCTTCT ATTTTTTAAC CTACTCAACA AAAACGGAGA CTATTTTTAG CTCAGCAAGC TGCAGGGCAT CACAATTAGC 001920
001921 AACTGAAAAT TACACATCTC GCCTGTCTCC CCTCTCTTGG CTGGCAGGGA GAGC
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Predicted Small Protein

Name NONHSAT012944_smProtein_1037:1285
Length 83
Molecular weight 9357.9236
Aromaticity 0.109756097561
Instability index 56.3720731707
Isoelectric point 8.98834228516
Runs 7
Runs residual 0.0505358462676
Runs probability 0.0699901582255
Amino acid sequence MPFYGLRAHFFLVMNNISLSGCNHSLPIHLLKGILVASKCWQLLIKLQLTQSIQPGLTRY
PELTYLCDHAIQQPVTSFWSSQ
Secondary structure LLLLLLEEEEEEEELLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLL
LHHHHHHHHHHLLLLLLLLLLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLL
LLLLLLLLLLLLLLLLLLLLLL
PiMo ooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiii
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