NONHSAT015145
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT015145 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
5918 nt |
Genomic location |
chr10+:81442731..81448650 |
Exon number |
1 |
Exons |
81442731..81448650 |
Genome context |
|
Sequence |
000001 GATGTAGAAG AACTTCTAAG AAGTGAGAGT GGAGACAGAG GCCAAAGATG CTGCTCTAGG CTGCTCCGTG AATTCCAGGA 000080
000081 CTTCTGAGAA GCACCTTCTG GACAGCGTCT TTACTGCCCT CCAGGACTCA GCTGGTCAGC AATGGCCAGC CAGACTCCAT 000160 000161 CCCCAGCGTG GAGAGGAGGT AGCTGATCCC AGAGGCGCTC CTAGCAGGCA TGTGGAACCC GAGAACAGCT CGCCCTGCCA 000240 000241 AGGCAATGGA GAGCAGGCCG GCAAGGCAGG AGCTCGGGCT CTGTGTGGCC AGGCAAGGAG GAGCCCCGCA ACCATGCCAC 000320 000321 CACCCCTTAC TACAAGAAGC CTCTGTATGG CATCTCCCAC AAGGTCATGG AGAAGAAGAA CCCTCCCTCG GGGGACCTGC 000400 000401 TAAACACGTA TGAGCTCTTC CAGAAGGCAA ATTCCAGCAA CAGCCCCTCG CTGCTTAGGC TCCTGAATGA GCCATAGAAG 000480 000481 TGGGACTGTG GCAGCACTGG GGCAGCCACC AACAGTGACC CTAACATCTA CTTCCTGATC CAGGAGATGT TCTACATGCT 000560 000561 CAACACCCTC ACGTCCAACA GGTCCCAGCT ACACAGCAAA GTGGACCTGC TCTCCCTGAA GGTGAACCCC ACTGAGATGG 000640 000641 TGGCCAAATT CCAGCCGACC CCCACCACCC CGTAGCAGCT CACGGGCATG GAGCTTAAGC AGATCTTGGA CCAGAGCCTG 000720 000721 TCAGGCGGGG TCCTGGCCTG CTGCCCGCTG GTGCAGCTCT TCCCCAAGCT CTTCAGCCAC AGTCAACTTC TCCCGAGGCT 000800 000801 GCAGTGCCTG CAGCTTTGAG GCCAAGCTTA AGCTGGAGTC ACTGCACCTG CAGCTCATCC ACAACTACAT GGAGGTCTAC 000880 000881 TACCCCTCGG TGAAGGAGAG GGCTGTGTGA CAGGCCGAGT GCTTGCCCCA GCTGAATAAG TTCTTCAGCC ACTTCTGGGC 000960 000961 CCAGCGGGAG ATGGAGAACA GCCAGCCCGG TGGCCAGGCT GCCAGCTTGA GGCTGAGCAG TGGACCCCGG CCACTTCCTG 001040 001041 GACCACAAAG ACGAGGAGGA GGGCCTGTCT CTGGACTGGA GCAGCACCAT CGCCTCAGAC CACGTGGTGG ACATGTAGGC 001120 001121 CCTCACTTAG TTCCTGCATG AAGCCTCTTC ACAGGCGAGT TTGCCGTCTT CCTCCTCCAC TGGCTCTTCC CTGAGCTCTT 001200 001201 CCACTACCGC AAGCTGGGCG AGCAGGACAG CTGCTACGGG GACGGCGGCA AGCAGGAGCT GGACCCGCAG AGGCTGCAGA 001280 001281 TCATCTGCAA CTTCACGGAG GTCTACTTCC CCCACATGCA GGAGGAGGAG GCCTGGCGGC AAGCAGGACC TGGACCCGCA 001360 001361 GAGGCTGCAG ATCATCTGCA ACTTCACGGA GGTCTACTTC CCCCACATGC AGGAGGAGGA GGCCTGGCTG CAGCGGTGCG 001440 001441 CCCAGTGCAT CAACGACAAG CTTCAGGGCC TGGGGCTGGA CGCAGGCAGC GAAGGCGAGC CCCCCACGCG ACAACTGCTA 001520 001521 CAACTCCTCC AGCCTGCCCG ATGACATCTC AGTAATCAGG GTGGAGGATA GCTTCAAGGG CGAGCGGTGC CGCTCCAAGA 001600 001601 AGATCTGACT GGTACCTATC GACTTGGTCA AATTGGAGAT CCCCAGCCCA ACTTGGAGGT GCCCGGCGCC GACGGCCTGC 001680 001681 TCAGCAACGA GCATCTTCAC AGTATCTACG AGAGCAGCCT GTCCATCGGC AACTTCACCT CGCGCCTGCT GGTGCCCCTA 001760 001761 TTCCCCAAGC TCTTCACCCA TGACAACCTG CACAAGCAGC ACAGCTGCAG CGACTCCCTG GGCAAGAAGC AGCTGGACCC 001840 001841 GTCCTGCATC AAGCTCATTC GCCACTAAGT GCACCTGCTC TACCTCTGCA CCAAAAACAA TCGCGTCTGG ACCCTTGAGT 001920 001921 TCATGGGCAA CCTGCACTGG AACAGGAACA GAGGCGCTCC TACCAGCAGC AGTGCAAGGT CCACGTGCTG GCCCCGAGTG 002000 002001 TAAAGACATG AGGAGCTATG CAATCAATCC TGAGAGGTTC AGAGAGGAGT CTGAGGGTCC CCCGCTGCCC CCGAGAGGAG 002080 002081 CAGCAAGGAC TTCTGCAAGA TCCCCTTGGA TGAGGTGGTG GTCCCTCACT GAGCTTCCCG GTGCGCTCTC CCTACCTGCT 002160 002161 GTCCGACAAG GAGGTGTGCA AGATCGTGCA GCAGAGCCTC TCCGTGGGCA ACTTTGCCGC GGGGCTCCTC CACCGCCGAG 002240 002241 AACCTCCAGC TGCAGTACAA CAATTTTCGG GCTTGCAACA AGAAGCAGCT GGACCCTACG CAGCTGCGGC TCATCTGCCA 002320 002321 CTAGGTGGAA GCCGTCTACC CCGTGGAGAA GGTGGAGGAG GTGTGGCACT GCGAATGTAT CCCCAGCAAC GACGAGCAGT 002400 002401 GCCACTGCCC TAACAGGAAA AAATGCAACA TCCTCAAGAA AGCCAAGAAA GTGGAGAAGT GAAGGCCCGT GGCCTGCCCA 002480 002481 GAGACTCGGG GTCACCAGAG ACTGAGCTTA GGAGCATGCC TATGGCATCC ACAGACAGGC ACCTTATGTC TGTGGGGTGT 002560 002561 GGCTTACTAC ACTTGCACAT GTAAACACCC AACCAACCAC AAGAAAGAAG ACTTGAGTTT GGTCTCTTGT CCTCTAGACT 002640 002641 TCTGTCCTGT GTTCCCTGGT GGTGCAGCCT GAGTGTGGGG AGCGCAAGCT GTGAGAGCAG GGACTAGTGG GTAGGGGTCC 002720 002721 TCTCTACCTG GTCGTGTCCT CCCCAGCCCC TCACAATTTC AAATGCAAAC TCAGCAGCTC TCTTGCTCCT CTTCCCATAT 002800 002801 TTTACAGCTT TCATTTTTAT CCAGTTTTTT TAAAATGAAA AATAAACCCT TAAAAAAATC ATTGGGCTCT TTGGGGGCCA 002880 002881 TTTTACTTAG AAAAAAATCT TTTTAAAAGT GCCATCTTCA GGCCAGGCAC GGTGGCTCAT GCCTGTAATC CCAGCACTTT 002960 002961 GGGAGGCCAA GGCAGGTGGA TTACCTGAGG TCAGGAGTTC AGGACCAGCC TGGCCAACGG TGAAACCCCA TCTCTACTTA 003040 003041 AAAAAAAAAG AAGCAAAAAT TAGCCAGGCG TAGTGGTGGG TGCCTGTAAT CCCAGCTAGT CAGGAGGCCG ACAGGAGAAT 003120 003121 CACTTGAACT CGGAAGGCAG AGGTTGCAGT GAGCCAACAT AGCGCCACTG CGCTCCAGCC TGGGCGAAAA GAGCAAAACT 003200 003201 CCGTCTCAAA ATAAATAATA AATAAATAAA TAAGTAAATA AAAGTGCCAT GTTCGTGTAC AATGCCTAAT CATAGCTTCA 003280 003281 GGTGACATGG ATACTGATTT TACTGACCTT GTCTTTTACA TCTGATTCTG GAAGAGTCAA GAGGCCTCTT GGATGGCAGT 003360 003361 AGAGGGGATG GAACAGTGTG AAGTCCTTTG CGACCATGTG CAAGTTTTCC CTTCTGCTCC AGTGCCTCAG AAGGCTTCCA 003440 003441 TTCAGCTTGG CCTGTCCATC AGGCACGTGG GTAAAATGTT GTGCTCACTG TGTAGAGGAG AACACTCGAT GATGATGAAG 003520 003521 AATGTAGAAA GCCATGGAAA CATGTCCGCA GTGTCTTCAT TTGAGCTGTG TCCTTCCACT GTCCCCATTC CCTCTCCACA 003600 003601 CATGGTTGCT TGTCAGAGAT TCTGGGTTCT GGGAGCTGTG TGGTGACTTC CCCAAACCTC AGTGTTAGCT CCTCCAGGCA 003680 003681 GCACCACATC CTCGTTCCCC AGGGCGGTCC ATGTCTGGGC CCCTCTTGGG GATACCAGGC ATTGGAAGGA CACAGGTCAT 003760 003761 CTCAGATGGG GCACCCATGT CCCTTCCCAG GGTCCACTCA GAACTTTCCC CTTGGACCCC CTAGAAAGTC CTGCTGTCCT 003840 003841 CCACCTGGCT ACCTCTTGGC TTTGGGAGAC ACATGTCTTC TCTCCCCACT GACTGAGAAT GTCAGACTCC CGCCGGCCAG 003920 003921 CTGCATGCTT TCCAGGAGCA CCAACCAGGA AATTCCCTGA CAGGTAAAAT CTTTAAAAAT GACACTTTTA CCTACCTAAC 004000 004001 TTTGGGGGCC AAATGCCTAA GAGGGAAAGG AAACAGTCTA ACCAGGGTCC AGGAAAATTA ATTGAATCCC ATGGGGTAGA 004080 004081 CATAAAACCC CTGTGGGAAT ATTACAGGTT CAATAACCTA ATGGCTTAGT ATTTTGCTAC TTTAAAATGC AGAGATAACA 004160 004161 GAAACAATCT GAATATTCTT CACATAGCTG GTAAGGACTT CAGTTCCAGT GGCCATATGA CATAATTTTG CCTGTACCCA 004240 004241 GAGGCATTTT TAAAAATATA ATATCAGATT TTAAGCAATG TAAAGTTGCT AATCTAACTT GTAAATTTGC TCGTGTCATT 004320 004321 TACAGATTAT TTCTGTTGAA ACTGCAAACC TGAATTGCTG AAATCTAGAA AGGCACAGGG ACTTACTCTG TCACACACAG 004400 004401 CTACTCGTGC ACACACACAC TGCTTACTAA AAGCTGAGGT GAGAGGAAGG GGGCCTACAT GAATAACAAG TTCAACTTCT 004480 004481 TTGTGCCTGG AAAGAAGGGA CTAGCGCAGC CAGGAGACTC ACTTTACCTC ATTGCTTGGG CCCTTCTCTA TGCCTTAGTC 004560 004561 TCTCCAGCAC ATGCACACAG CATGCACACA CAGGCTCCCT ACCCAAAGAC AGCTGTGGCC TTCTCTCCAC CTGGCCGCTG 004640 004641 GTTGTTGGGG CTGAGGGGTC CCATGAAATT TGTTCTGGTT TCTATGATGT AAACAAGAAG ACTCTAAGCC CTGAATTGCC 004720 004721 CTGCTTTCTA GAGGGTGAAA TGTTGACCCT GCAACTTTAG AACCACAATT ATTAATAACT CTTTTGAAAT TCCCATCTAC 004800 004801 CCATGTCAGA GAAGTTCAAC AAGTTCTAGG AATTAAATAT GTCTGTTTGT AACCTAGAGC ATGCTCAATT TTTGGAAACC 004880 004881 ATATTTCAGT GATGATTTTC TTAACACCTT TCACGTGTAG GGCTTCTTGC CTCAAAATGT TACAGTCCCT TTCTGTGAAG 004960 004961 AGAAATGGAC ACATCCTGGG AACTATTCCT GTCCCTCTGG ACTGTCGTCA GGAAACGACT GCAGGTCCTG TGCCCTGTCT 005040 005041 ATATCATGTC CTCACTTCTC CATCCATACA GGTGGCTCCA GTGGGCATTT TTTTATTTTA AACTTTTTAC ACGAAGGAAG 005120 005121 AGAAGTAGAA AATACTGATT TTTTTCAAAA TTTAATGTGT TCCATGAAAT CTACTGGCAA TCCCTTTCCT TCCCCCTGTC 005200 005201 TAAATTCTTT GGTTTTTACT TGTTTGTTTT TTTTTGTCTT GTATCCCAAG GACTAAAAAA TTAGCAGACA CGTTTTGATG 005280 005281 TTGACTGAAC TAGTAAGTCA CAGTAGGTGG TAGGGTTCAT TGGTTTCTCT GTTAGTAAGT TTTTAAAGAA TGAAGATAGT 005360 005361 TATGAATGTA CTGAGTGGCC GTTTAATTGG TAAGGGTCGC TGACCCAAAA ACACTAGAGC ATGGCCACGT GGTTTCCTGT 005440 005441 AGAGACGGCC TCAGTTTCCA ACATTTTCCC CAAATGTTTG CTTCTCACCC AATAGAGGGA GGATCTTGAG ACTCCCAAGT 005520 005521 GGTGGTGAGC TTGCACCCTG CCTCACTGTG TAGACAGACT GTATGGATAT ATGAAGTGGG GGTGGGGGCC AAGGGGCTAT 005600 005601 TACTGCTGTT TGGAAATATT TGCCTCTTGT AGATCCAGCC TTAATGGTTT TGTGACATCC TAGTACTAGC AAACCCTGCA 005680 005681 CAAAGTGGGT ATCAGAGTTA ATACTGTGAG GAGACAAAGT AGTGAGAATA GTTTTGCTAA AGATAATGAA GTGTCACATA 005760 005761 ATGTCTGCAT TTTACCATTG ATTTGAGTGC ATCCTTAGAA AAACTTAATG TAATGAAAAA CCCAGGACAT TTTTGGAAAT 005840 005841 CGTATGCTCT CTAGCAACTT TGTGTGAATT TTTATACAAA CACTGTTTTA TGAGTTACAT AAAATGTTAT AAAAATAG |
Predicted Small Protein
Name | NONHSAT015145_smProtein_209:412 |
Length | 68 |
Molecular weight | 7292.2086 |
Aromaticity | 0.0298507462687 |
Instability index | 81.9402985075 |
Isoelectric point | 7.91400146484 |
Runs | 9 |
Runs residual | 0.00898648120653 |
Runs probability | 0.0342695636813 |
Amino acid sequence | MWNPRTARPAKAMESRPARQELGLCVARQGGAPQPCHHPLLQEASVWHLPQGHGEEEPSL GGPAKHV |
Secondary structure | LLLLLLLLLHHHHLLLHHHHHHLLEEELLLLLLLLLLLLHHHHLLLLLLLLLLLLLLLLL LLLLLLL |
PRMN | - |
PiMo | - |