NONHSAT015182
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT015182 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
2628 nt |
Genomic location |
chr10-:81522331..81524958 |
Exon number |
1 |
Exons |
81522331..81524958 |
Genome context |
|
Sequence |
000001 AGGAACCAGA CTGTGAACAA GTTTACCATT TAGTCCTTTG GACTGTGTCT TGAATTCATC CCTCTTCTCC ATTCTCACCA 000080
000081 GCACCATCAT CATGATGGCT AATATTTCCT GAGCACCTTT CATTCAGGCA TGATGCCAGG TGCACCAACT TACTTAATCC 000160 000161 TCATAGCCAC CACCTGAGCA AGCTCCTGTT TTATAAATGG ACCAGTTCTT GTTGCTGTTG TACAAGTTAT TTTCTTTCTA 000240 000241 TAACGTCCTC CTTGTCCTCC TTCCACATTC TTAAAGAAAC TTTCCCTTCC TTTAAAGTAC TCAGGGAGCC CTGCATTGCT 000320 000321 TCTTGAAGCC TTCTCCAGCT TCATCATCTC ACAGTGGTCT CTCTTTTCAC TAAATGTCCA ATATGCTGCA CATAAGTACC 000400 000401 CCAAAGTTAG CACAGAATTG TTCCATGGCT GTCATATATG TTAAAAATCA TTAAAAGTTC ATTTTTTCTC CCATTATGGG 000480 000481 AAGGATACAT GCTCCTACTA GTAAATTTAG TTGGTAGAAA AAAATTATCA CTATCTAGAC TGCTTTCCCT TTAGTCTTTA 000560 000561 TGCATAGCTT TCTGTCTGCC TATTTTTACT TTGTGTTTGT AACTTACTAT TATAAAATAT GCATCTCTAT GTTCATTGTC 000640 000641 AACATTATTT ACAATAACAT GGAGTGGATT TACATGTATT CTCTATATTT GGATTAAAGG AGATAGAGTA TGTGAAATTA 000720 000721 AATGGGAGAA GTATCTGATA CATAACAGGC AATACAAATA TTATCACATA GCGTCAATTT ATTTGTGAAT ATTGAAAGCT 000800 000801 CCAAAAAAGA AAAAAAGTTT TTTTTTAATT CCCGTAATTA CTTATTGCAG TATTGTGTTC ATACAAACTG CTCAGTCATT 000880 000881 TTGGAGAAAT AACAATTTTT TTCCTCATCA TGAAGTAAGG TATGCTCACT GCAAAAAAAA TCTAGAAAAT AAAGAGGAAC 000960 000961 ATGCTAAAGA AAAGAATACT CCCATATAAT CTCTGTCTTC ATAAATAATC TTTTGTAACG CTTATACACT GCTGGTGGGA 001040 001041 ATGTAAATTA GTTCAGCCAT TGTGAAAAGT AGCGTAGCAA TTCCTTGAAA AACTTAAAAT AGAATTACCG TTCAACCCAG 001120 001121 CAATCCCATT ATTGGGCATA TACCCAGTGG AATGTAAATC ATCCTGCCAT AAAAACACAT GCACATGTAT GTTCATTGCA 001200 001201 GCACTATTCA CAATAGCAAA GACATGGAAT CAACCTATAT GCCCATCAAT AGTAGACTGA ATAAAGAAAA TATGGTACAT 001280 001281 ATTCACCACA GAATACTAAG CAGCCATAAA AAAGAAAAAG ATCATGTCCT TTGCAGCAAT ATGGATGGAG CTAGAGGCCA 001360 001361 TTATCCTAAG CAAACTAATG CAGAAACAGA AAACCAGATA CTGCATGCTC TCACTTATAA GTGGGAGATA CACCATGAGA 001440 001441 ACACATGAAC ACAAAAAGCG GAAAAAGAGA CACCATGGCC TACTTGAGGG TGGAGGCTGG GAGGAGGGAG AGAATCAAAA 001520 001521 AACTTCCTAT GGAGTACTAT GCTTATTACC TGCGTGATGA AATAATCACT TTGAACATTG TCAGTACATT ATCTTCTAAT 001600 001601 CTAGACTCTT TTCTATGTTC TATATGCACA CAGAAATACA CATGCAAAGC TGAACACATA TGTGAAACAA AATTCAGACA 001680 001681 CTCAAATTTT CCGCCAATAC ATGATAAAAT CTTGCACAAT AGCTTCCTCC ACAGAGGAAA ATGTCTTTAC TACATCTTAA 001760 001761 AAATGGGGTA AATGAATAGT TAGGCTCTTC AGTGTAATAA TCATGGTAAA TATTCTCAAT GTGCGAAAAT ACAAACAAAA 001840 001841 GACTTTCTCT CCCAGCAAAT TTAGACCCAC ATGAAAATTT AAGCACAATC ATTTTAAACG AATTTACCCT GGAGCTTAGT 001920 001921 GGTTCGAGCT CAAGGTTGAG GAGCAGTCTG GGGACATCAG CTCTTAATAT TTTTCAAGTT TTGGAGCAAG TGGTTTCTAG 002000 002001 GTTCTGAGTG AAGTGAAACA GAATCTCTAG GGGCATGTGG TAAAGATAAT CCCATACTAT GTACTGCGTA GAGTTAAAGA 002080 002081 GAAGAGGCGA GAGCATGAAG ATAAACCAGT ACAATCAGTC GTTCACATAC CACTAACTAC AATGATACTC CCGTTTGCTT 002160 002161 CCTGTGAAGT AGTTACTAAT AATCACTGAT GTCGCTTTTT AATTTCATAC ATCCTTTAAC TATCTTCATA TAGGTATTGA 002240 002241 AAGAGTCAAC ATAAAAGCCA CATCCATTTT CTAATTTTGA ACAATAGTTA GAGAAACCTA ATATCTTCTC ATATTTTTGT 002320 002321 CTTGCTTCTG TCTCATGAGT TCCCAAAATA GATATATTAT CTGAATGAAG AGTTCATGGG CAAATGTCAC ACTTTTCTTG 002400 002401 GTTTGGCTAA TTATATTTCT GCTTTTGCTT AGAATAAGAT TAATTTTCCT ATTCTGCTAA TAAACCACGT GATGGCAAAA 002480 002481 TGCCTTATTC TGAGAAAAGA AGCCTTTGGT ATTTTAAAGA ATTGGGAAGC TATTTCAGAT AAGCTATCAT ATGCATGAAG 002560 002561 ATTAATTTAT TCATATGAAA TGTTCAATAA CCAGAAAAGA CTGTTTTAAA TAAAACCATT TCACAATT |
Predicted Small Protein
Name | NONHSAT015182_smProtein_1178:1447 |
Length | 90 |
Molecular weight | 10559.8118 |
Aromaticity | 0.0561797752809 |
Instability index | 64.6674157303 |
Isoelectric point | 7.21624755859 |
Runs | 14 |
Runs residual | 0.0141000220313 |
Runs probability | 0.0486915486916 |
Amino acid sequence | MHMYVHCSTIHNSKDMESTYMPINSRLNKENMVHIHHRILSSHKKEKDHVLCSNMDGARG HYPKQTNAETENQILHALTYKWEIHHENT |
Secondary structure | LEEEEEEELEELLLLLLLLLLLLLLLLLLLLEEEEEHHHHLLLLLLLLEEEEELLLLLLL LLLLLLLHHHHHHHHHHHHLLLEELLLLL |
PRMN | - |
PiMo | - |