NONHSAT017925
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT017925 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
589 nt |
Genomic location |
chr11+:9546768..9549499 |
Exon number |
2 |
Exons |
9546768..9546933,9549077..9549499 |
Genome context |
|
Sequence |
000001 TTGTTTTGTT TTGCTTAAGG TTGCAATTGT AGCTCAAGAC TTGGCAGCAT TCCATACTGC CTCATCAGAA ATGGGGCACC 000080
000081 AGCAGCATAG CCATCACTTA GTAACCACAG AAACCAGACC TCTGACCTTA GTAGCAACAT CCAATGGCAC CCAGATTGCA 000160 000161 GTTCAGCTTG GAGAACAGCC ATCTCTGGAA GAAGCCATCA GAATAGCGTC TAGAATCCAA CAAGGAGAAA CGCCAGGGTT 000240 000241 GGATGATTAA TCCTCAGAAC AATGGAGCAA TAAAGCAGAA GGAGTCTTTC ATCTTCTGGC AGCAGAAATC CATGAAGCCC 000320 000321 GGGCCCAGGA AAATTAGAAG TTTTCCATTC CTGATACACT GTACACATTT TTATGCGAGA GTGGAGAACA TTTTATTCTT 000400 000401 GACACTTTTG TGTATATAAC CCTTGGAATA GATTCTCAGA GTGATTCATT GTGTACAAGG AAGTATGAAA TTAGGGCAAT 000480 000481 ACAGTAAATT TTCATGTTAC TCTTTTATCA GATCACAAAC TCCTAGAGTC TACATGCAAG ACTAGTAAAG TCTTATGGAG 000560 000561 TCTTATGATG GATTTTTAAC TTCCCGTGG |
Predicted Small Protein
Name | NONHSAT017925_smProtein_242:418 |
Length | 59 |
Molecular weight | 6895.1525 |
Aromaticity | 0.137931034483 |
Instability index | 54.5639655172 |
Isoelectric point | 10.0393676758 |
Runs | 10 |
Runs residual | 0.01582038651 |
Runs probability | 0.0273361596891 |
Amino acid sequence | MINPQNNGAIKQKESFIFWQQKSMKPGPRKIRSFPFLIHCTHFYARVENILFLTLLCI |
Secondary structure | LLLLLLLLLLLLLLLEEEHHHHHLLLLLLEELLLLEEEELLHHHHHHHHHHHHHHHLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTToo |