NONHSAT018704
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT018704 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
941 nt |
Genomic location |
chr11-:33686770..33718544 |
Exon number |
4 |
Exons |
33686770..33687110,33691070..33691191,33692461..33692525,33718132..33718544 |
Genome context |
|
Sequence |
000001 caggttttgg tgagaaggag gagcacaggt ggaacagctt ttggggagac aatcagcagt tttatttggg atatgtgaag 000080
000081 tttttggtgt ctggtagacc tcctggtgga gaagctgtgt agcaggggcc catataagcc tggagttcag gagaaagcct 000160 000161 gggctggagg tacacgttgg ggagttgctg acaggtaggt ttatttaaaa aacgaagtca aatgaaatca ctgagggagt 000240 000241 gagggtaggg agaaagagaa ccaaatattg agggtggagg cactctcact taagaagatg gggagaacag gaggaacctg 000320 000321 caaaggagaa tgaaaaggag tggagtcagg tgtctcggca gccaaaggag gaagtggtcg cctctgacag actgtgccga 000400 000401 caggccaagt aagGCACAGC TAAAGAAATG TGTTACTGAC AAGCCTGCAG GCCACATGGC GAGATGGAAA GCAAGCAGTA 000480 000481 AAGACCAAAG AAACTCGTTG AGGACAATGG AAGATGGGCT CAGAAGAAAA TGGATACAGC TGAAGCTAGA TGGGTCATGG 000560 000561 GTGAAAGCAG GACAGGACCT CATTCTCCAA CAGATACCAA gtccataaaa gccctggggc tcagtcagag cagggcagaa 000640 000641 gagagagaga ctatgggaca accagcagca gagaggaact accctccctg ctgagagctt cagagacatg cagagatgtc 000720 000721 tgaacaagtt gctgcggaga ggagccacgc tctccagggc ctcctctctg ctgagagcag cagacagtgg aatgagcagt 000800 000801 gggcagagag gagccaccct ccccagggcc acctctttgc tgaaagctga acactccatg ggatgacctg cctacagaga 000880 000881 gaagctaccc actgtgggtc tcctctgagc tgttctaaca ctaaataaac ctccttttca c |
Predicted Small Protein
Name | NONHSAT018704_smProtein_329:607 |
Length | 93 |
Molecular weight | 10517.1388 |
Aromaticity | 0.0434782608696 |
Instability index | 70.3380434783 |
Isoelectric point | 10.5803833008 |
Runs | 15 |
Runs residual | 0.0278385986863 |
Runs probability | 0.0499970558794 |
Amino acid sequence | MKRSGVRCLGSQRRKWSPLTDCADRPSKAQLKKCVTDKPAGHMARWKASSKDQRNSLRTM EDGLRRKWIQLKLDGSWVKAGQDLILQQIPSP |
Secondary structure | LLLLLEEELLLLLLLLLLLLLLLLLLLHHHHHHHLLLLLLLHHHHHHHLLHHHHLHHHHH HHHHHHHHHHHEELLLEEHHHHHHHHHHLLLL |
PRMN | - |
PiMo | - |