NONHSAT018704

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT018704

Source

NONCODE4.0

Same with

,

Classification

antisense

Length

941 nt

Genomic location

chr11-:33686770..33718544

Exon number

4

Exons

33686770..33687110,33691070..33691191,33692461..33692525,33718132..33718544

Genome context

Sequence
000001 caggttttgg tgagaaggag gagcacaggt ggaacagctt ttggggagac aatcagcagt tttatttggg atatgtgaag 000080
000081 tttttggtgt ctggtagacc tcctggtgga gaagctgtgt agcaggggcc catataagcc tggagttcag gagaaagcct 000160
000161 gggctggagg tacacgttgg ggagttgctg acaggtaggt ttatttaaaa aacgaagtca aatgaaatca ctgagggagt 000240
000241 gagggtaggg agaaagagaa ccaaatattg agggtggagg cactctcact taagaagatg gggagaacag gaggaacctg 000320
000321 caaaggagaa tgaaaaggag tggagtcagg tgtctcggca gccaaaggag gaagtggtcg cctctgacag actgtgccga 000400
000401 caggccaagt aagGCACAGC TAAAGAAATG TGTTACTGAC AAGCCTGCAG GCCACATGGC GAGATGGAAA GCAAGCAGTA 000480
000481 AAGACCAAAG AAACTCGTTG AGGACAATGG AAGATGGGCT CAGAAGAAAA TGGATACAGC TGAAGCTAGA TGGGTCATGG 000560
000561 GTGAAAGCAG GACAGGACCT CATTCTCCAA CAGATACCAA gtccataaaa gccctggggc tcagtcagag cagggcagaa 000640
000641 gagagagaga ctatgggaca accagcagca gagaggaact accctccctg ctgagagctt cagagacatg cagagatgtc 000720
000721 tgaacaagtt gctgcggaga ggagccacgc tctccagggc ctcctctctg ctgagagcag cagacagtgg aatgagcagt 000800
000801 gggcagagag gagccaccct ccccagggcc acctctttgc tgaaagctga acactccatg ggatgacctg cctacagaga 000880
000881 gaagctaccc actgtgggtc tcctctgagc tgttctaaca ctaaataaac ctccttttca c
[back to top]

Predicted Small Protein

Name NONHSAT018704_smProtein_329:607
Length 93
Molecular weight 10517.1388
Aromaticity 0.0434782608696
Instability index 70.3380434783
Isoelectric point 10.5803833008
Runs 15
Runs residual 0.0278385986863
Runs probability 0.0499970558794
Amino acid sequence MKRSGVRCLGSQRRKWSPLTDCADRPSKAQLKKCVTDKPAGHMARWKASSKDQRNSLRTM
EDGLRRKWIQLKLDGSWVKAGQDLILQQIPSP
Secondary structure LLLLLEEELLLLLLLLLLLLLLLLLLLHHHHHHHLLLLLLLHHHHHHHLLHHHHLHHHHH
HHHHHHHHHHHEELLLEEHHHHHHHHHHLLLL
PRMN -
PiMo -