NONHSAT025136
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT025136 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
562 nt |
Genomic location |
chr11+:130580104..130590268 |
Exon number |
2 |
Exons |
130580104..130580342,130589946..130590268 |
Genome context |
|
Sequence |
000001 TCGTACAACC GTGACCAAGA GGGCAAGCAT CTGCTCTCAT GTGGCTGCCT CTCCTGCCTT TGTGCCATTC CTGTTAAATG 000080
000081 AACTCGTGTG TGCCATGGTG CCCGGCTCAT ACCTGGAGAG AGTAGTTGCT ACACATGGTA CCTATTGTGC TCACTGCTTC 000160 000161 TCCTGGCTCT AGGTCCCACA TCAACTCATC CTTCATCACA TTGTCACTTC TCATGTGTGC TGTTTGCCCA CACACCTTTC 000240 000241 ACACACACAC ATCGATTTAT GATGTACACA CGCATGCTGA GCTATGATGC CTGCATGCAC ACATGTGCAC ACACACACAC 000320 000321 CAGGCTACGA AGCACACAGA CACACGGGGC TACAAGGCAC ATACACACAC ATAGGGCTAT GCTATACACA CACGCACCGA 000400 000401 GCTAGGATGC ACACGTACAT GCCAGGCTAC GGTGCACACA CACACACACA CACACACACA CACACCGAGC TAGGATGCAC 000480 000481 ACGTACATGC CAGGCTATGG TGCACGCACA CACACACACA CACACACACC GAGCTAGGAT GCCCATGCAC ACACTGCGCT 000560 000561 AC |
Predicted Small Protein
Name | NONHSAT025136_smProtein_134:286 |
Length | 51 |
Molecular weight | 5474.2769 |
Aromaticity | 0.06 |
Instability index | 51.046 |
Isoelectric point | 6.55548095703 |
Runs | 7 |
Runs residual | 0.0246783625731 |
Runs probability | 0.0683120094885 |
Amino acid sequence | MVPIVLTASPGSRSHINSSFITLSLLMCAVCPHTFHTHTSIYDVHTHAEL |
Secondary structure | LLEEEEELLLLLLLLLLHHHHHHHHHHHHLLLLLLLLLLEEEELLLLLLL |
PRMN | LLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTToooooooooooooo |