NONHSAT025158
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT025158 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
759 nt |
Genomic location |
chr11+:130937379..130957497 |
Exon number |
3 |
Exons |
130937379..130937842,130956344..130956516,130957376..130957497 |
Genome context |
|
Sequence |
000001 gcctggttaa ccacccaaca aaggcaggtc tgttatgcaa tagacaaggt cttgatagta acacttggga Tccaggctga 000080
000081 ctggtcaggg gcctgaagtg acagagattg aaagactggg gactaggagg tctaaggtag cggcatgtgg atgggcatgt 000160 000161 tcaaggcgcc atgttgaaga tcttcatgtc attccttaat gaccaccaga tatcatcctc cagggaaagg acactcaaaa 000240 000241 accgtcaaaa caaaagaagc cagggagttg acattagcca ttagtgtctg aatgacatgg ccatggtggc agaggtggag 000320 000321 gtcctgcctg ggtccaacaa catgggctct cactcaccgg gaccgacttc tgctactgct atgttcaacc tgccagcaac 000400 000401 agagactaat gcggagactc caaaatggca tgatacctca aggagaccaa ctggacactt gaagGGTCTC ATATGGGCTC 000480 000481 ACGTGCTCTG CTTGAGCTCC TCTTTCCTGT GTCACCATCT AAAAAGTATC CTTGGTCAGA AAGCTTAATA CCTCCTCTGA 000560 000561 AGACTGATAA TATACATCAT CTTCCTGGAC CAGTCTACAA GTGAGGGACA GTGAATATTT TGAATGGCAG CTTTTAGGAT 000640 000641 AACAAATCCT CAAAGAGAGA TAGAGTCTTA CTCATCTCTA ACATGTGCTT GACTGTGGAA GACTGCCAAT TAATAATGAT 000720 000721 TGAGTGATTT GCTAAATAAA TAAAATCTCT GAACATTGC |
Predicted Small Protein
Name | NONHSAT025158_smProtein_296:547 |
Length | 84 |
Molecular weight | 8906.1347 |
Aromaticity | 0.0481927710843 |
Instability index | 43.0 |
Isoelectric point | 7.90753173828 |
Runs | 9 |
Runs residual | 0.031593038822 |
Runs probability | 0.0415317278063 |
Amino acid sequence | MAMVAEVEVLPGSNNMGSHSPGPTSATAMFNLPATETNAETPKWHDTSRRPTGHLKGLIW AHVLCLSSSFLCHHLKSILGQKA |
Secondary structure | LLEEEEEEEELLLLLLLLLLLLLLHHHHHLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHH HHHHHHLLHHHHHHHHHHHLLLL |
PRMN | - |
PiMo | - |