NONHSAT027552
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT027552 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
578 nt |
Genomic location |
chr12-:31577503..31579685 |
Exon number |
2 |
Exons |
31577503..31577621,31579227..31579685 |
Genome context |
|
Sequence |
000001 TTTTGTCCCA ACCACAGTCC TGACTTCACA ACCTTTTGTA TTCCCAATAA AAAGACTAAA TGAAATGAAA TGTCATCTCA 000080
000081 CTTTGAATGA GTTTTAACGT GATGGGGTTT CTGTCACTTT ACTTCTCACA GGAGTTAACA GTTGTTATGG GGTGGCATAT 000160 000161 GAGTGTCCTC TGTCTTTTAG TACACTAAAA CATTAATTGT TGTTATATGC ACATACACTT ACGGACTTTT TTGCATTTCA 000240 000241 TTTGTCTCTG CACTTGTTTG TATAAGGTTA AGAAGATTAG AAGAATAGCT AATGTTTACG CATTAAAAAT ACTCCTTGAT 000320 000321 TTTTTAGAAA TATATGCAAG AGGCACGAAG TTTAGGAAAA AACCTGAGGC AACCCAAACT GTCAGACCTC TCTCCTGCAG 000400 000401 TTATTGCACA GACCAACTGT AAATTCGTAG AAGGCTTATT AAAAGAATGT AGAATGAAGA CAAAGCGCAT GTTGGTGGAG 000480 000481 AAGATGGGAC ATGAAGCGGT GGAACTTGGC CATGGAGAAG CAAACATCAC CGGCCTGGAG GAGAACACCT TGATCGCCAG 000560 000561 CCTTTGTGAC CTGCTGGA |
Predicted Small Protein
Name | NONHSAT027552_smProtein_206:421 |
Length | 72 |
Molecular weight | 8435.1017 |
Aromaticity | 0.112676056338 |
Instability index | 61.5394366197 |
Isoelectric point | 9.71795654297 |
Runs | 8 |
Runs residual | 0.0358784284655 |
Runs probability | 0.0229641406112 |
Amino acid sequence | MHIHLRTFLHFICLCTCLYKVKKIRRIANVYALKILLDFLEIYARGTKFRKKPEATQTVR PLSCSYCTDQL |
Secondary structure | LLEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLEEL LLLHHHLLLLL |
PRMN | - |
PiMo | - |