NONHSAT028442

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT028442

Source

NONCODE4.0

Same with

,

Classification

sense

Length

541 nt

Genomic location

chr12+:53691572..53693230

Exon number

2

Exons

53691572..53691934,53693053..53693230

Genome context

Sequence
000001 GGCTGGCGGA ATCATGGCTC ATGCTGGGCT GGCTAGTTTT TCCCTTAATT CTTGCTTCTC AGATGTATGT CCCTGGGAAG 000080
000081 CTGCATGATG TGGAACACGT GCTCATCGAT GTGGGAACTG GGTACTATGT AGAGAAGGTG AGTGAGAGCA TGTGGATGCC 000160
000161 CCTCTAAACA GGGAAGGGAA ATTCAGGGGA AGCTCTAGAG CGCAGCATGG CCAGAGGGAG TCTCCTTTTA GCCCCTTATT 000240
000241 CACCTCTGAT CTTGTAGACA GCTGAGGATG CCAAGGACTT CTTCAAGAGG AAGATAGATT TTCTAACCAA GCAGATGGAG 000320
000321 AAAATCCAAC CAGCTCTTCA GGAGAAGCAC GCCATGAAAC AGGCCGTCAT GGAAATGATG AGTCAGAAGA TTCAGCAGCT 000400
000401 CACAGCCCTG GGGGCAGCTC AGGCTACTGC TAAGGCCTGA GAGTTTTTGC AGAAATGGGG CAGAGGGACA CCCTTTGGGC 000480
000481 GTGGCTTCCT GGTGATGGGA AGGGTCTTGT GTTTTAATGC CAATAAATGT GCCAGCTGGG C
[back to top]

Predicted Small Protein

Name NONHSAT028442_smProtein_20:166
Length 49
Molecular weight 5493.4816
Aromaticity 0.125
Instability index 46.6479166667
Isoelectric point 4.86297607422
Runs 9
Runs residual 0.0219298245614
Runs probability 0.0494514121965
Amino acid sequence MLGWLVFPLILASQMYVPGKLHDVEHVLIDVGTGYYVEKVSESMWMPL
Secondary structure LLLHHHHHHHHHHLLLLLLLLLLEEEEEEELLLLEEEEELLLEEEELL
PRMN -
PiMo -