NONHSAT028442
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT028442 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
541 nt |
Genomic location |
chr12+:53691572..53693230 |
Exon number |
2 |
Exons |
53691572..53691934,53693053..53693230 |
Genome context |
|
Sequence |
000001 GGCTGGCGGA ATCATGGCTC ATGCTGGGCT GGCTAGTTTT TCCCTTAATT CTTGCTTCTC AGATGTATGT CCCTGGGAAG 000080
000081 CTGCATGATG TGGAACACGT GCTCATCGAT GTGGGAACTG GGTACTATGT AGAGAAGGTG AGTGAGAGCA TGTGGATGCC 000160 000161 CCTCTAAACA GGGAAGGGAA ATTCAGGGGA AGCTCTAGAG CGCAGCATGG CCAGAGGGAG TCTCCTTTTA GCCCCTTATT 000240 000241 CACCTCTGAT CTTGTAGACA GCTGAGGATG CCAAGGACTT CTTCAAGAGG AAGATAGATT TTCTAACCAA GCAGATGGAG 000320 000321 AAAATCCAAC CAGCTCTTCA GGAGAAGCAC GCCATGAAAC AGGCCGTCAT GGAAATGATG AGTCAGAAGA TTCAGCAGCT 000400 000401 CACAGCCCTG GGGGCAGCTC AGGCTACTGC TAAGGCCTGA GAGTTTTTGC AGAAATGGGG CAGAGGGACA CCCTTTGGGC 000480 000481 GTGGCTTCCT GGTGATGGGA AGGGTCTTGT GTTTTAATGC CAATAAATGT GCCAGCTGGG C |
Predicted Small Protein
Name | NONHSAT028442_smProtein_20:166 |
Length | 49 |
Molecular weight | 5493.4816 |
Aromaticity | 0.125 |
Instability index | 46.6479166667 |
Isoelectric point | 4.86297607422 |
Runs | 9 |
Runs residual | 0.0219298245614 |
Runs probability | 0.0494514121965 |
Amino acid sequence | MLGWLVFPLILASQMYVPGKLHDVEHVLIDVGTGYYVEKVSESMWMPL |
Secondary structure | LLLHHHHHHHHHHLLLLLLLLLLEEEEEEELLLLEEEEELLLEEEELL |
PRMN | - |
PiMo | - |