NONHSAT029145
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT029145 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1352 nt |
Genomic location |
chr12+:64784522..64790845 |
Exon number |
3 |
Exons |
64784522..64785208,64785357..64785458,64790283..64790845 |
Genome context |
|
Sequence |
000001 GCGCCCTCCC CAGCCCTGTC CAGCCTCTCG ATCTTTGTCC TAACCTCAGA CGGCGATGGG CGGGGCAAGA CGCTGGTCCT 000080
000081 TCAGGCCCGA GTTGATGGGC ACCTCGGGCT CATCACCGTG AAGTCCCCTG CGGCCGAAGG GCGGTGGATT TTTAGGGTCT 000160 000161 CTCCCGCCCA CCCCTAATGC CAGTCCCCAC CACTGCGTAC TCTGTTGCGG ATCACACCAT CCAATACAAA CTTTATTGGT 000240 000241 AATGGAAGCC AGCTTCAATC TGGTTTCCTG TTAGAAACTT GAAAGAGTTT AATTTACCGA TTTATTTTTA ACAACCCTAG 000320 000321 AAACCTATTA AACCCAATCA CACAGATTTA GCTTTTGGTT ATAACATGGC CTGGCACAGC TTTCTGATAT TGTCGGAGTG 000400 000401 TAAACATAGG TCTTCTTTCT CCAACCAGTG AGAAAGGGAt tttttttttc ttttctcttt ttttttttga gacgcagctt 000480 000481 tgctcttgtt gcccaggctg gagtgcaatg gcgccatctc ggctcaccgc aacctccccc tcccgggttc aagcgattct 000560 000561 cctacctcag cctcctgagt agctggaatt acaggcatgc gccaccacgc ccagctaatt ttgtatattt tagtaaaaac 000640 000641 ggggtttctc catgttggtc aagctgatct ccaactcccg acctcagGAC AATCTATGCA GGAAGAATGA ATGGGTGATG 000720 000721 CTGGCATCTT GAAAAGTTGA AGCTGATAGA CTGAAGAATG CGGATTACAT ACCCTGAGGC TGCAGAGGAT TTTTTCTCAG 000800 000801 GCAGCCAAGA AGATGGTGGA TTGAGACTGA GCATGCCTAC CACAAGCAGC TGACCATCAT TCAAAGCAAG AAGAGGGTAC 000880 000881 TGCTAAAGGA AACTGGCAAG AAGCAGCTCC TATGGTACTT ACAAGAACAT CGGTCTAGGC TTCAAGAGGT CCAAAGAGAC 000960 000961 TATTGAGGGC ACCTACATTG ACAAGGAATG CCTGTTCACT GGTAACGTCT CCATCTGAGG GCAGATCCTG TATGGCATGG 001040 001041 TGACCAAGAT GGAGATGCAG AGGACCACTG TCATCCAGAG AAACTATCTC CACTACATCC GCAAGTACAA TTGCTTCGAG 001120 001121 AAGTACCACA AGAACTTGTC CATGCACCTG TTCCTCTGCT TCAGGATGTC CAGATCAGCG ACATTGTCAC GTTGGATAAG 001200 001201 TGCCAGTCCC TGAACAAGAC GGTGTACTTC AATGTGCTCA AGGTCACCAA GGTCGCAGAC ATCAAGAAGC AATTCCAGAA 001280 001281 GTTCTGAGGC TGAATGTCTG CCTGCTCCCC AAAATGAAAT AAAGTTATTT TCTCATTCAT ACACACAAAA AA |
Predicted Small Protein
Name | NONHSAT029145_smProtein_596:709 |
Length | 38 |
Molecular weight | 4190.8017 |
Aromaticity | 0.0540540540541 |
Instability index | 53.5162162162 |
Isoelectric point | 6.23272705078 |
Runs | 5 |
Runs residual | 0.0446317877511 |
Runs probability | 0.0124536301007 |
Amino acid sequence | MRHHAQLILYILVKTGFLHVGQADLQLPTSGQSMQEE |
Secondary structure | LLHHHHHHHHHHHHLLLEEELLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |