NONHSAT030445
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT030445 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
887 nt |
Genomic location |
chr12+:105629068..105764958 |
Exon number |
7 |
Exons |
105629068..105629134,105720748..105720841,105742380..105742404,105759585..105759620,105760395..105760474,105761250..105761287,105764412..105764958 |
Genome context |
|
Sequence |
000001 AGCTCAAAGG ACTTGACTCT CATCTCGAGT GTGCTAATGA AGTTCCCTTG TGCGACAAAT GGGGCAGATC AGTTCTGTTT 000080
000081 GGAAGAATGA AAATGACAGC TAAGTGGTGT GATCTAACTG ACACAGGGAA AGAAGCTGAA ATTGACCACT CAGGAAATGA 000160 000161 GGCCCTGCAG GAGCAGCCAA AGATGTAACA GAAGAATCCG TAACAGAAGA TGACAAGAGG AGAAACTATG GAGGAGTATA 000240 000241 TGTTGGCCTA CCATCTGAAG CTGTCAATAT GGTGTCCAGT CAAACAAAGA CGGTTCGGAA AAATTAGAAG AAAATAACAT 000320 000321 CATGACTCAA GAATCAAGAG CTTGCTCATC AGTTTGGAAG GAATTTGGCT CCGTGGGACG TTGTAATGTG CACAGACATT 000400 000401 TCCAAGGAAA TTCTAAACAG TCACCCTTCC CTTTTGCATT CCCCCAAATC TTAAGTGTAT ACATAAAACC CTGGGTACAT 000480 000481 ATTGTTGTGG TAATAGAAGG GAATTGGTTA AACAGTACAC TTGTTTATGG AACTTTCTGT GGCCACCTAC GAAAGACAAG 000560 000561 TTAACAAACT GTCATGGAGG CTGTTGTTGC CCAGCCAGGG CCGCTGCATT TTGACAACAT TTCCACCCTG GCCACTCAGC 000640 000641 ACATTTCATG GAGGTCATGT CTTTTCACTG ATACTTTTTT GATAGTTTTT ATATAACAAA ATCCTTATTC TATTTATAAC 000720 000721 TTAAGATGAT AAGGCACTAT AAATTAATGA CCTAAAATAA TATATTTGTC TGTTATCTTT TGCTATTTCT ACTTCACTTT 000800 000801 AATTTTTAGC TGTAAAATTG GTAAATGGAT TCTTACAACT ATCTCTTTCC ATTTCTTACT ATTTGGTTTT CAAATTTCAT 000880 000881 TTAAATG |
Predicted Small Protein
Name | NONHSAT030445_smProtein_209:316 |
Length | 36 |
Molecular weight | 4357.2043 |
Aromaticity | 0.114285714286 |
Instability index | 69.6714285714 |
Isoelectric point | 10.2864379883 |
Runs | 7 |
Runs residual | 0.0188861985472 |
Runs probability | 0.0340929164459 |
Amino acid sequence | MTRGETMEEYMLAYHLKLSIWCPVKQRRFGKIRRK |
Secondary structure | LLLLHHHHHHHHHHHHLLLEELLLHHHHHLLLLLL |
PRMN | - |
PiMo | - |