NONHSAT030466

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT030466

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

3304 nt

Genomic location

chr12+:106533813..106537368

Exon number

3

Exons

106533813..106535694,106535800..106535939,106536087..106537368

Genome context

Sequence
000001 CCTTTCACTG AAAGGGCCAG ATCCTGGCGA TGGTGACAGG AACGGTACCC CGCACGGTAA GGGTCAGGCA GGAAGGGCCT 000080
000081 CCCACCGCGG CGTGGCTGCC GCCGTTCTAA GAAGAGACCA TGAAAAATAA GGAAGAAGGC TAGAGAAAAA GAGGTCTTAG 000160
000161 GGAAATTTTT TTTTTTAACA AGTGGTGCAA TGTACCAGAC TAGGGTGGGA AGAGTGAAGG CTGAAGAAGG TCTGGTGTTC 000240
000241 TGCAGATCGC ATGGCGGTTC TTTTCCACCA GTGGACCTCA CTGGGGCCTC CTCTGCAGCT CTCAGGTGCA GCCCTTCCTC 000320
000321 TACATTCCCG CCGCCTTCAT TCCTGTCTAC CCCTGGTCAC CTTACCCCGG ACTCCAGCAA CAGCCCGCTC TCCCCAACCC 000400
000401 TCCCCGGGAG CCTCCTCACT GCTGCCAGAG TAATGGCCTG AAACACTGCC CTCATCCTCC ACACGTGTCT CTGCTGTACT 000480
000481 CTGACGCGTG ATATTCTTAC CTGTCCAAAC TTTCCTTCTA CTGATATTTC ACACAAACTT CCCTGCCCCT TCTTCCCTTC 000560
000561 CCCAGGAGCA ATGACAGAAC ACAGACACAA AGGCGCATCA TGCCTATTCA ATTCCTATTC TGTCCACCGC ATTTGCAGGG 000640
000641 CCTCCCTGCC ACCCACCCCC ATCCTGAAAC TGTTCTGCTT CTATACAGTT TGTGGACGTT GTGCCTATAG ATCCCACagt 000720
000721 caggatgagt ggcatgcagg ttgagtcctg gcttcccaga ggattggctg tgtggccttg gtcaaatgac ataacctctc 000800
000801 agagcttcgg ttttctctta agatatggat TTAGCAGATC TATTGTAGAG ATAAACACAT TGTGTCTACA GTAGTATTTT 000880
000881 Aaaatatttt ctacttcttc ccctcccctg cgatgtggta gaaatccact accccatcct cttgaagtta gatgagacca 000960
000961 tcggacttgc ttaggccaat ggaatgagag cagaagtgat tgtgttgctt tcacttggaa cctttaggag ccagtgagca 001040
001041 aatccccatg tcttcttttt cctatcttga caatcatggt ggtacaaagt tggagcctcc ccaagccagc ctgagtctct 001120
001121 gtgtaaagat ggcagaaaat cccagccaat ctgcattgga aaagtagtgt cagcaaatat taaactttat ttatgttaag 001200
001201 tcagtgggat ttgttaaagc agcataacct ggcttattct ggctgataGT GTTACTCCCA GATATGTGGG ACTTCATCAG 001280
001281 TATCTATTGA ATCAACAGCA TCATCTACCA TAGGCTGGTA CTGTTTTATG ACAGTAAACC CTCctctgta aagtagctgt 001360
001361 ttacaatccc tattttcaat tgaagaaacc gtatcagaaa ggttaagtaa tttcccagag gttacacagt ttgtaaatgg 001440
001441 caggaccagg atttaaaccc tacctgtcca gttccaaagc tcccccttct cctttcatat atgccatgct ccgtctcCtt 001520
001521 aaatgggaag gatgaaaaac acccagtaca atgcctagca cacagtcatg cccaggcact gggagttcCT CTCCAGACTG 001600
001601 AATTCCTACC ACGTTTATAA TTGGAACCAC ACTTCAGCAC AATGCTATCA GGCATTGTGT GTGAATGTTT TCACATCGAT 001680
001681 AAAGCATTTT CTCCAACAAG AGCCCAGGCT CCTtgattaa gagcttcaga tctagaggca gagtgactag gttcaaatcc 001760
001761 ctgttccacc tcttatgatc atcttggata attgttttcc ccctctatgc ctcagttctc taatctgcaa agtggcgatg 001840
001841 gtaaCTTtca tgtgcgtctg tgtgaagaga ccaccaaaca ggggtaggta aaggaaaatt acagtcaaag aaaggggggt 001920
001921 tgttctctgg cgggcagggg tgggggtcgt gaggtgctca gtgggggagc tttttgagcc aggatgagcc aggaagagcc 002000
002001 aggaaaagga ctttcacaag gtgatgcgat ggcttggctt gggcacagag gcctgacaGT AACAATGTAT GTGGTATTAG 002080
002081 CAATTACGCC aataacacat cccacagggt tggtatgagg attaaGGGCT AGACTATATC CACTCAATAA ATCGTGGATA 002160
002161 TTAATACGAT ACTTTTCATC TTCCATAGCT CCTACTAGAA TTTGGAGCCt tttttttttt gcgatggaat ttcactcttg 002240
002241 tcacccaggc tggagtgcaa tggcacgatc ttggctcact gcaacctccg cctccctagt tcaagcaatt cccctgcctc 002320
002321 agcctcccaa gtacctggaa ttacaggcat gtgccaccac gcccagctaa tttttttgta ttttcaatag agacgaggtt 002400
002401 tcaccatgtc ggtcaggctg gtctcaaact cctgaccaca ggtgacccac ctgcctaggc ctcccaaagt gctgggatta 002480
002481 caggaatgag ccaccgtgcc tggccTGGGG CAATTTTAAG CAGTTTAATC ATACTGCTTG GTTAGACTCT GATTTCTGGT 002560
002561 TTTGTTCTTG GATACAGGAC AGATGTAGTA ACATTGGCAC TTGAAAGTGT GACATCCACA CTATCCTACA TCTTTTATTT 002640
002641 ACATAAGGCT CATTACTGGT CCTTCACTGC ACTTTCTATT TTCAAAGCAA TTTAAAAGAA AGAAGGTATG TTCGCTTTCT 002720
002721 CAAGAAATCG TTGTTCAgga atcctgtcat tcaggcagca tagatgagct tggaggacat tatgttgagt gaaataagcc 002800
002801 aggcacagca agacaaatac cacatgttct cactcatatg tggaagctaa aaaagttaat ctcattgaag tagagagtag 002880
002881 aattgtggtt actagaggtt gggggagggg acagggatag ccaaaggttg gttagcgagc acaaaattac aactagataa 002960
002961 gacaaataag tgctcatctt tgatagcact gcagggtgac tataattaat aatttaattg GGAGGATACA ATAAATTAGT 003040
003041 AATTTATATT GTGTATTTAA GAACATACAG TAGAatatta tattgtatat attcattatt gattgtatat atttatttat 003120
003121 tgtatgttta taatttattg tatataaatt atatacaata tattgtctat attaataatt tattttatat attcagatag 003200
003201 ctagaagagc agattttgaa tgttcccaac acaacaaaat gatatatgtt tgctatgtga ataaccctga tttgatcatt 003280
003281 acacgttgta tgcatgtatc gaaa
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Predicted Small Protein

Name NONHSAT030466_smProtein_599:709
Length 37
Molecular weight 4127.9345
Aromaticity 0.111111111111
Instability index 61.2694444444
Isoelectric point 6.20391845703
Runs 5
Runs residual 0.0415695415695
Runs probability 0.0250839074368
Amino acid sequence MPIQFLFCPPHLQGLPATHPHPETVLLLYSLWTLCL
Secondary structure LLEEEELLLLLLLLLLLLLLLHHHHHHHHHHHHHLL
PRMN -
PiMo -