NONHSAT031087

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT031087

Source

NONCODE4.0

Same with

,

Classification

sense

Length

4019 nt

Genomic location

chr12+:120115160..120119424

Exon number

2

Exons

120115160..120117806,120118053..120119424

Genome context

Sequence
000001 TGTGCTGAGA CGAGGAATGC ACGTGTACAC ATGCAGGTGT CCCTACAGTG GTCCCTGCCG GGCTGCCAGG ACAGGGTCTC 000080
000081 AGTGCTTGTT ACCCTACAGG GTACCCAACA GGGCTTGCCT TTCTCAGGTC ACCTCCTGTG CTGGGAGTGC CCCTGCAGCT 000160
000161 GGGTAGCCAT CCTGGTATAG GCCCAGAAGA GGCCAGTGGT AAGGACAGCA CGCCTCAGCT GGCAGGGCCC ACCATCTTTC 000240
000241 CAGCACTGAG TTGGCAACAG TCTCAAATAG GTCACAGGTG AAGAGTTTCA AGGACATGTA GCTTCTGCCT TAGAAGCACT 000320
000321 TAGTTGACAC TGCTTCCCTT AGCTCTAACT TTACAAAGGT TGGTGGGTAA GATGACTTTC AGTGCCCTCC TAAGCTAGTG 000400
000401 AGGtttgttt tttttttttt ttttttttga gacggagtct tgctctgttg cccaggctgg agtgctgtgg tgccatcttg 000480
000481 gctcactgca agctccgcct cccgagttca cgccattctc ctgcctcagc ctcccgagta gctgggacta caggcccccg 000560
000561 ccaccacgcc cggcaaattt tttgtatttt tagtaaagat ggggtttcac catgttagcc aagatggtct cgatctccta 000640
000641 gcctcgtgat ccacccgcct cggcctccca aagtgccggg attacaggcg tgaaccaccg tgcctggccA GGTTTTGTTT 000720
000721 TTTCTAGAAA AGGGAGGCAT CACTAGCCAT CTTCTCTGAT GGAGACTGCT GCTGGGAATA GACAAGCTGA GAGTGGCCCA 000800
000801 GGGGGCTGGG AATATGAGAA TGTCAGGACC CCTCTGTCCA AGGTAGCACT AAGCTCTAAT GTAAACTGTG GTTACAGTTG 000880
000881 TCACTACTAA AGGGTTaaca tttattttgc cccaaactaa tcttaagtgc ttttcgtgta ttcttattca agcctcacaa 000960
000961 caaccatgtg aagtaggtgc aattattacc cccattttag ggatggggaa actgaggcac agagCAgtag ggagaacact 001040
001041 taaaatctac tgtcttagag attttcaaga atacattgtt actaatagtc accgtgttgt acagtggatc tcttgaacgt 001120
001121 attcctcctg tctaactgaa atgttgtatt ctttgaccag catctcccta cccccaccac tcctagccgc tggcaaccac 001200
001201 cactctactc tctacttctg tgagttcgac tttcttggat tccacataag tgacatcaca tgggatttgt ctttctgtgc 001280
001281 ctggctcatt tcacttaatg tcctccaggt ttatccatgc tgtcacagat gacaagattc cttttgtaag gctcagcagc 001360
001361 actgcattgt gtatcagtac ctcatttctt tatccattca tccattgtgg acacctacgt tgattccacg tcttggctat 001440
001441 tatgaataga gctgcagtga acgtgggagt acagatatct cgacatgctg atttcatttc cttggagtat ctaccctgta 001520
001521 gtgggattgc tagaccatgt ggtaatttta gttataactt tttaggaacc ttcatgccat tttccataat ggttgtacta 001600
001601 atttacatgc ccatcagcag tgCACTAaaa gtagctttta agtgttctca ccacaaaaac atggtaagca tgttctgcgt 001680
001681 gtgttgatga gcttgattta gccattccac aatgtgtcca tatttcaaaa caacatattg tacatggtaa atatacataa 001760
001761 ttttatctgt caatCTTTGA AATTGATTAA TTTTTTAAAA ACCCCTCTTA GGCTCACACA GCAACTGGCT GAGCCAGCAG 001840
001841 TCACATCAGG CTTGGCTGGT GCCAGATCCT TGGTAGTTGG TGCTCTCAGC AGCCACCCTG AATGGCCTCC CAGCGGGAGC 001920
001921 TTGCTGAGTA TTTGTTGACA CAATGATTGG CCCAGCCTCT GGGATCCTAA GCCTACAGCA GTTGTTCTAC ACTTTTTTCC 002000
002001 ATTTGAATTG CATTTATAAC AGTTGGGGGT ATACAATGAA AAAATaaatc ccgatttctg gcttctctta aaacatagga 002080
002081 aggtgcggcG GGCAGCTCTG AGTGCCAGCC CGGTGGCAGA TTTTCCAGAG TAGTGGTGTC TTGCCCAGGT ATCCGTTTCA 002160
002161 TTCTTCAGGT TCATTGAGTC TTACAGATAC AAGTTTTGAA TCCATTGCTC AGGAGCGTTT AGTGCAGATG GTCTCTTCCT 002240
002241 GTGTTCTCTG AAAGTGCTGT TAATAGCTGC TTTCTTCCTG CCCCACCCTC CATAAGAGGA CAGGGCCGTG GCCCACACTT 002320
002321 GAAAGAGGCC GGGGTAAATG CCTGGCCAGA GACACACACC GATGCCTCCA GCAGGCATGC AGGGAGCTCC CTTCAGGTCA 002400
002401 GAAGGCGTGA CCTTCATCTC ACCTGTCGTC TTGGACAAGC CCTTGCGCTG CCTGATTTGG GAAGAGAGGT CGGCCTGAGC 002480
002481 GCTGCCTCCT GTCCTTTGAT ATCTGGCACT GGGAAGTAAA GGGGAGAATC TTGGTTTCCA AATCCCAAAT GCTCACCGCT 002560
002561 GCCTTTGTTC CCTCACAGTG TGATCCAGCT TTGCTTCCTG AGCCCAATCA CGTCATGCTG AACCACCTAT ACGCGCTGTC 002640
002641 TATCAAGGAT GGAGTGATGG TGCTCAGCGC AACCCACCGG TACAAGAAGA AGTACGTCAC CACCTTGTTA TACAAGCCCA 002720
002721 TATGAAGAGC TGGGGGCGGA TGGTGGCCCA GGAGACAGCA CACCACCAGG CTCCACACGT GCATGCTTTC CCCAAGAGGG 002800
002801 AATGGACTGT ACATTGCTCA TTTCACACTC TTCAGAAGAC ATTTCATACC TGCCCTGGTC CTGCTTGAAG GTTTGTCCAG 002880
002881 GCAGAGCAGC TCCTGCAGCG CCTCGGTCTG TGACAGTCCT CCTAGCACCC CCATGGCTTT GAGCCTCGGG GACTCATCAA 002960
002961 GTCCAAGAAA AGAGGGAGGG GTGGCAGAGG ATCTGCAGCC CTGGCCCCGC GGTGCATGAG GCTGGGTGCA GTTCTAAACC 003040
003041 TACATTCTCG ATTTTTCTTA AGCCAAAAAT GAATGCTAAC TCCTTTGCCA GTAAAATTCT GGGAAACAGG GACTGAGGCC 003120
003121 ACACATCATT TCCAGTCATC TGTGTGTTTT TAAGGCCAGC CACTTGTCCC TGTTGAGGCC TGGCTATGGA ACTAAATACA 003200
003201 GTGTTGGTCT TGCCTGTCCT TCAAAATCAA CAACAGATTG TCTCTCGGCT CCAGGGAGGT GTCATTTCTA TAGAAATTAG 003280
003281 AAGCTTTCTG ATTTCTAGAT GAGGTTTTAC AATTGTTTCT TACAGTCATG TGCACTAAGT ACTCTTTTTG TAAGCAGAGG 003360
003361 TGGCTGGCTC TGCAGCCTTA AGGCCATTTT TTAAGTCACC ACGTCTAGAA GTCACATGAA CTCTGCTCAG CAATAATCTG 003440
003441 TTCTCAGAAC AGACTTTTCA ACCTGCTGCC GGATTTCTCC ATTCAGCTGG ATGATCCTCA GGACTGACCA GTTAGCTGGC 003520
003521 AGGTTGTCCA GCTTTTTATT CCAGTCATAA TAGGTGACAG TGTTAACCGT GAAAACTTGA GAGGCACTCT GCCCTCTTCC 003600
003601 CTATAAAATC ACACAGCGTG ATTTTACAAG GTCCCGTGGC ACCTTGCTCA GGACCTCTGC CCCTAGTTAG CAAGACTGCA 003680
003681 GCAGTTGCTG TTGCTTATTC TGAAAGGAAT GTAGAACTTG ACAGCAGCCT TCTGAGTCTG GGTCAGGAAG ATGTCCTTTG 003760
003761 GACCAAAGCA GACTTCTTTA TACGCAGCTC AGTTTCCCGG GAGTCGCCAC AGATGTACCC ACTAGCCCAG GTTGCTGTGA 003840
003841 GTCAGCGGAA GCTCCCGTTA TGCCCTTTGC TCCTGGTGGG AGAGGGAGGA GTGAGCTCCC TGGGTTCCAG TATTTACTTG 003920
003921 GTATACCTGA GTTTGGGGGT ACCCTTTTTT GTGACTTTTC AAAACAGTGA ATTACTGTCA CCTTGATGGA CAAGTTTCAA 004000
004001 TAAAACTTTG TAAAAATAA
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Predicted Small Protein

Name NONHSAT031087_smProtein_3812:3985
Length 58
Molecular weight 6100.1478
Aromaticity 0.105263157895
Instability index 46.7771929825
Isoelectric point 5.89471435547
Runs 14
Runs residual 0.0916666666667
Runs probability 0.0165669871552
Amino acid sequence MYPLAQVAVSQRKLPLCPLLLVGEGGVSSLGSSIYLVYLSLGVPFFVTFQNSELLSP
Secondary structure LLLHHHEELLLLLLLLLLEEEELLLLEEELLLEEEEEEEELLLLEEEEEELLEELLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLL
PiMo iiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTToooooooooooo