NONHSAT036068
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT036068 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
2240 nt |
Genomic location |
chr14+:25108305..25110690 |
Exon number |
2 |
Exons |
25108305..25108468,25108615..25110690 |
Genome context |
|
Sequence |
000001 CATCTATTAT TTTTCTGGAG TTTGAGTATC TACTAGAACA ACCTTTAATT TTCCCTTATT GCCTATTCTT ATCATTGCCC 000080
000081 AGCCACCATC ACAAATGAAA AAAGGATGGA GAAGAACAAG TCTGGATGTT GGGTTGGGGA CAATCCAGTA AGACTCTGGA 000160 000161 GTGGTTCCGG GTTGGAGCAA GTTGAAAGGC ATCAATGTTC TGGGCTGTGA TGTCACCTTC AATGTGACCT TGGGTCATTC 000240 000241 TCAAGATCCA CCCCACATCC CCATAACCTG GGGGTTTTTA CATTCCCAGG ATCTTTGCCC ACCAAGGCCA CTGCCCTTTC 000320 000321 CCAAAGCATC TTGTTTCCAC AGAGTCTGAA GTTCACATAC TAATGTTCTG GAGTGATGGA CTCTCTCTTA AGTATCTTGT 000400 000401 TTACAGTCTC ATGCTGTGCA TTTTTTTTTT TTTTACCATG TCTGCATGGG ATATGGCAAA GGGTTTGGTT TAGTGTAGAT 000480 000481 AAAAAGAATG CTGCAGAATC ATTCGCTAGA ACCTTTAGCA TATGATTGCA AAGTTGGTGG GTCTTTCTCT TTTTCTCTCT 000560 000561 ATCTCAAAGT TCAGGGCAAG TATAATAATA AGTTATTGTG TTTGGAAACA AATTCATGCT TAAGCATTCT TATGTTATAT 000640 000641 CCCCTCTCTG TTCCCCAGAC GTGGTATGAC ATCTACTTGT GGACACACTC TGCTTTCTGG TTTTTCTGTT TCTGATTAGA 000720 000721 AACTCAAAAA CAATATGAGA AACATACCTG AAAACAGCAG AAGATCTGGA TCATTCCGGC CAGCAATTCA AAGTCTGCCA 000800 000801 AAGGGAAATC AAGTATTGTA GAAACCTACG GGGCCTCTCA GAGCATTTTA CCAGAACTGT GGCAGGGTGA CTGATTGTGG 000880 000881 TATTCTCTTT GTATTCTCTA TGCTGAATCA TTTGCCAGAA CTTCCAATAT ATGATTGCAA AACTAGACTT TTTTAATGTT 000960 000961 ATCTTGTCTC AGATTTCTAA GCCTGAAAGA TTGAGGCTGT TGCTGAACGA TGCTTAATTA ACCAAGGCAT TGAGCTCCAA 001040 001041 CCATGAGGCT TTGAGGAGTT TGATATCTAG CCCCTCTTGG CATCATATGC TAAGACTGGC TGTGAGGCTA TGAGAATCTT 001120 001121 AAGTACCTGC ACGCTGTTCA TAAGTGGTAC TCTAAAACTC CTGAGGAAAT AAGGGAGACT GGAATTAGTG GGATTAGCTT 001200 001201 GTGGGATTAG CTTGTGTCCT TTGGCTTAGC CTCTTTCTCT CCAGAAATTT CACTTTTGGC TCAGTCCTCA CAGGGGAAGA 001280 001281 AAGTCTTGTC CAAAGATGGC GTCTACCCTG TGCTCCACTG TGTATCCCAG AGGAGAGCAT CTTTACTGTG GAATGGACTT 001360 001361 CCAGCTGACT CATGTTGGGG AAAGGTGAGC TGGGGCATAG GCACCTCATA GCTAGCTTCT AATAATCTGA GGTTCTCATT 001440 001441 TGGTAGCAGA ATTAGTTGTT TTGAGCATGA CTCTGGTGAA GGAGAAATCA AGGAAGAGGG ACAGAAAGGG CATTAATATG 001520 001521 AATCCCTATc ttactgtatt acaaagcgta taaaagcggg tttatatatg ttatctcatt gcattctgta catgctgtat 001600 001601 ggcagttaac cttgatcaca ttttaaaatg aaagactcag agatattaag tgatgtgccc caggtcacat ggttaCAAAA 001680 001681 AGTGTACACA CACACTACAT GCCTGAAAAG CTGCAAACTT TCCTCTCTAT CAGTCTTAGA AGTGGGGAAG CTTCTTCTAA 001760 001761 GTTGGCAATT TCAACTCAGC GAAGCAAAGT GCCCTCACAA TTAGAGTTCT CTTGGGAATG GCTGTTCTGG TGAGCCCGTG 001840 001841 TACTTTCTCT CCAGGGAGTT GTTGCAACAG TGGCTGGAAA ACATCTTAGG GCAACTGGGA GGTTATCATG AGCATGCACA 001920 001921 TAAGATCTTT TAAGACCTCT TGCAACTGTG AGCATTTGCC TCTCAGCTGG AAGAGATCTG ATCTGGGATT CGATTGCCAA 002000 002001 TTTCTGGGCC TCTTACCATC ACCTATCAAA AGAGGATATG GGCTACAATA CAGGTTTTAA AATGTTTTTA ACTATAGAAT 002080 002081 CCTTTCTTCA AATGGATTAT GTATGTGTTA AGGTAGCTTT TTGAAATCat atgtctatat ttatctatat tctgtatacc 002160 002161 taaacctata tctctatttt tacatatcta tttacacata tctttatata tctttactta tctttacata tgtatttaca 002240 |
Predicted Small Protein
Name | NONHSAT036068_smProtein_1907:2059 |
Length | 51 |
Molecular weight | 5865.8125 |
Aromaticity | 0.14 |
Instability index | 85.512 |
Isoelectric point | 9.35247802734 |
Runs | 9 |
Runs residual | 0.0153216374269 |
Runs probability | 0.02114859958 |
Amino acid sequence | MSMHIRSFKTSCNCEHLPLSWKRSDLGFDCQFLGLLPSPIKRGYGLQYRF |
Secondary structure | LLEEEELLLLLLLLLLLLLLEEELLLLLLHHHHLLLLLLLLLLLLLEELL |
PRMN | - |
PiMo | - |