NONHSAT039448
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT039448 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1470 nt |
Genomic location |
chr14-:95988307..95990858 |
Exon number |
2 |
Exons |
95988307..95988760,95989843..95990858 |
Genome context |
|
Sequence |
000001 AGGTTTTGGA ACTAGACTAC TGCAATGAAA CAACTTTCTC TGTTAGGGAA GTGTCCTGGG CTGTCAAGAA TTATCATCAA 000080
000081 GAGCAGCAGG TTTTATAAGA TACATGGACC TATTTGGCAT TTACCAGCCC ATGCCGCTAG GATAGAGGGA CAGGGCTGGG 000160 000161 CCCCAAGTGT GGGCTTCCCG GAAGAGCCAA GCACCGGCTG CTCATATGGG ATGGGTGGGG GTGGTGCAGG TGCCCTGCAT 000240 000241 GGGTTCCACT GCCCTAAAGA GGGTACAAAG GCCACACCTC CGTGTGTCTG CCAGGGCTGG GTTCAGAGCC TCCCTGGCTT 000320 000321 CCTGGGCACT CTGCCTATCA CACAGCGATT CCAATATGAT CACATGTTCA GAACAGCCAC ACTTGTCAAA GCAAGGAGAG 000400 000401 AACACTTCAG CAACGTTCAA AAACATGTCT CCAGGGATTA AAAAAAAAAC ACGGAAAGCT TCATTTTCCT CCCTAGTGGG 000480 000481 GAAGTCTTCC TTACTCACAG CCTCTTCCTG AGTTGGTGTC TGTCGTGAAG CATTCTTTGG AAGCATAGTA AGCGGAGGGT 000560 000561 TTAATTTACC ATAGTCGTAC acatttgcac agaatctaaa gtttgcagtg cgtttcatca tctttatgtg aatctcatgc 000640 000641 agctcttaca gggaaaacag gaagaactgg ccccattttc taaatgtgga gacaggagga ggtgagatgg ctcgcctctg 000720 000721 cccagccgac tgggaaatgc agagctcaga gagacagcaa gtcaggagat gttgatccag ggagcttttc actctgccac 000800 000801 CCACCCCATC GATGGAAGCA CCGACATTAT CAAGGCTGCA TTTAGATTTC AAAACAAAAG CAAGCAAACA TGCCGGGCTC 000880 000881 GTGGTATGCT GTTGTTTTAA CCGAAATGAT ACAGCTGAAA GGGTGAGCAG CCATCAGTGC TGTGAGCGAA GCGTGATCAC 000960 000961 ACATCTTGTA TGTTTAGCAA CTCAGGAGGT AGCTGAGCCT GGAAGTGACT TTCCTGccaa aaaccaggaa caacccggat 001040 001041 gtccttcaac aagggaaggg tgacccagcc cgtgatgcat ccgtcacact gtggattgct gctcagcaac gaggaggcac 001120 001121 agactcgata cgggagccag cctgggtgac gctccagaga actaccctga gtggagaagg gcagtcccac cgtgtgattc 001200 001201 cattattatc acattcttga aatgacagaa ttatagaaag gagaacagag gagtggctgc cagagtttaa ggagggaatg 001280 001281 gggaaagggg gaagagcagc atgcgggatc cttgtgacgg aagcgttttg tgtcgtgtgg gtgtctgtca gtttcctagc 001360 001361 tgtgatactg taccattgtc ttgtaagatg ctgccatcgg tggaaactgg gtaaagcata taggggacct ctctgtatga 001440 001441 tttcttacaa ctgcatgtga atttacagtg |
Predicted Small Protein
Name | NONHSAT039448_smProtein_1277:1459 |
Length | 61 |
Molecular weight | 6686.1292 |
Aromaticity | 0.116666666667 |
Instability index | 44.0816666667 |
Isoelectric point | 9.17962646484 |
Runs | 8 |
Runs residual | 0.0164007092199 |
Runs probability | 0.0477278749338 |
Amino acid sequence | MGKGGRAACGILVTEAFCVVWVSVSFLAVILYHCLVRCCHRWKLGKAYRGPLCMISYNCM |
Secondary structure | LLLLLEEEEEEEEEEEEEEEEEEHHHHHHHHHHHHHHLLEELLLLLLLLLLEEEEEEELL |
PRMN | LLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLL |
PiMo | oooooooooooooooTTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiiiiiiiii |