NONHSAT040147
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT040147 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1557 nt |
Genomic location |
chr14-:103653558..103655365 |
Exon number |
3 |
Exons |
103653558..103654607,103654714..103654784,103654929..103655365 |
Genome context |
|
Sequence |
000001 CGGGGCGCCA GGTACAGCCG GCGGGACGTC CAGTGCCAGC GCAGGAGCCG GGCGAGGCCG TGGCCTCCAG GGTTCCTGGG 000080
000081 CGGAGGACAA GGCGCGCAGC CGCGTTGGCG CGAGTTTTAA ATCGGTGCCT TCTCAGCTTT GCAAGTTCTT ATCAATTGCT 000160 000161 GCATGCCAGA GGAAGTTTTT AAAAAATGGC CCCCAGCTCT ATTGCGGTGT AATTGATGGA TAGAAATTGT ATTTATTTAA 000240 000241 GGTGAACAGC TGGATGATGT GATGGAGGCA CGCAGGGTGG AGGGGTTACC ACAGTCTAGG TACTCTACAC ATCCAGAGCC 000320 000321 TCCCACAGTT GACAAATGGA TTTTCCTAAT CAGTTTCGTC GTGTTTTGTA CTTAAGTTGA GGATTCCACA CCGTGTGGTA 000400 000401 CTTTCAGAAG AGATGTAGTG GTGAATCAAT CGCAACGGTT GTGATGTTTT CCTAATTAGG TATTGAGAAT TACCATTGGT 000480 000481 ATTTGGAATT AGATTGCGGA GCATTTAGGA ACCGTTCTCG CTATGTTGCC CAGGCTGGTC TTGAACTCCT CAGCTGAAAT 000560 000561 GAGCCTCCCA CCTCGGCCTC CCAAAGTGCT GGGATTACAG GCGTCCCCTC TGCCCCAGTA CTGTTTCCTC TCCCCAGCCC 000640 000641 AGCCCCCACA GCTGCCTGCC CTGGCCTCAC TCCCTGGCCT CCCCCATCCC AGCCTCTGGG TCCCTGAGTC AGTCCCTGGG 000720 000721 GCTGTCTGCC TTCTAGGGGA GCCTCTGGTG TGGACCAGAA AGTAACCTAA TCCCTTCCAG GCCCACCCTG GAAACAAAGG 000800 000801 GATTTGTCCA CTAGCCTGGT GGTGAGAACC ATGTGGCCTC CTGTCTCTGG CAGAGAGGAC TCCAGGATCA AGGGCAGGTA 000880 000881 AAAGGAGGAG CCTCCTGGGG AGCTTCAGAA GGAGGGTCCC AAGTCCCTCC TGCCCCACTT CTGTGCCTGG GTCACTCACA 000960 000961 CCCCTGCCTG ACTCTAGCCC CCCTTCTCCA GGGGTCTCCA CAACATGTGA ATCATGCCCA GCGTCTTCCA TTACACCCTT 001040 001041 GATAAAGTCC TCTCCTCACC AGGACCTCTG TCATTTTACC TCATGGTTTT GAAATAATTT TTGGTCTTCT TAGCAGTTTA 001120 001121 AAAATATTGT TTTGTTTTTT TTCCTGAGTT TGGAGCATTC CTGTTACTAA TTACATTTTT TTTTTAGACA GGTGTACACT 001200 001201 ACTACACCCA GCTAATTTGT TTTGTTTTGT TTTGTTTTGG TAGAGATAGG ATCTTGCTAT GGTACCCAGG CTGGTCTTCA 001280 001281 ACTCCTGGGC TCAAGCAATC CTCCTGCATT GGCCTCCCAA AGTGCTGGAA TTACAGGCAT GAGGCAGCAC GCCCAGCCCT 001360 001361 AATTACTTCT ATTACGCCAA ATTCCTTGTG TGGAATTCCT GTGCTTTGCA CACAAATTGC CAGGTTGGCC CCAAAGGGGA 001440 001441 AAAAAGTGGA TCCCATTTTC CCATCTTCTA TGCCTACGTG GCTGACAAAT CTCCCGAATC CCACAGGAGC TGTCGCTGAT 001520 001521 CTTTGTCCTC TATTCGCTGA AATAAAGTTC ACCATGG |
Predicted Small Protein
Name | NONHSAT040147_smProtein_1013:1096 |
Length | 28 |
Molecular weight | 3070.6636 |
Aromaticity | 0.148148148148 |
Instability index | 72.2151851852 |
Isoelectric point | 8.21063232422 |
Runs | 6 |
Runs residual | 0.0155662909286 |
Runs probability | 0.0286021315433 |
Amino acid sequence | MPSVFHYTLDKVLSSPGPLSFYLMVLK |
Secondary structure | LLLLEEEEHHHHLLLLLLLLEEEEEEL |
PRMN | - |
PiMo | - |