NONHSAT042331

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT042331

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

5268 nt

Genomic location

chr15-:48477048..48483533

Exon number

3

Exons

48477048..48481237,48481681..48482354,48483130..48483533

Genome context

Sequence
000001 GTTTAATTGA TTTACTGCTG AAATCCTTGT TTTGCTCTCT TTGCTGCATT CCTGGCTGTG CTGCGGGCAT TTTGCTGTGC 000080
000081 TTTGGTGACA GCCGTTTTCA GTAGAACAGT AGGCACTAAA TTCTTACACG TTTCTTCTTA TCCGGTAAGG AAAATTCAGG 000160
000161 AGTGAAAGGT GTATTGATTT AACTGGAGAC TGAATGTGTC GTTTGGAGTT CTTTTCCTCT ACTCTTTCCC TTCTCTCTTC 000240
000241 CACACAAACA CAACTGAATC CCCTTCCGTT TCTAGGAGAA GGCGCCTAGG CGCTGTCCGT AGTGCTGAAA TGGTGCGTGG 000320
000321 TGAGACCTGT CTCCCCAACA CAAGCTAGAA GACAACAAAA TAGCAGCCAG GAAACGCTCT GATAAAGCTC TAGATAGCTG 000400
000401 CCAGgtgatg ccagagatta ctagttttgg gaccaattaa agtagcaagA TGCAgccagg agtggtggct tatgcctgta 000480
000481 atcccagcac tttgggaggc cgaggtagga ggatcacctg aggtgaggag tttgagacca gcctgaccaa catggcgaaa 000560
000561 ccctgtctct actaaaaata caaaaattag ctgggtgtgg tggtgggtgc ctgtaatccc agctactcag gagactgagg 000640
000641 caggagaatc acttgaactc aggaggcgga cattgcagtg agctgagatt gtgccactgc actccagcct gggtgacaga 000720
000721 gcgagacatt gtctcaaaat aaataaataa ataaaaataa aGTAGCAAGA TGCTAGAGAT ATTGAATTCT GGCAATGCAG 000800
000801 TCAGTCATAG ATTGTGGGAA AGGAGATCAT TTTATTCCAT CTATTATTCT ATGTATGTTT CCAAACTGTT ACAAAAATAA 000880
000881 TTTATTCAAA ATTAGTTCAG AGACTAATCA TGTAAACATT TTGTCTGTAC AGTATGAACA ATTTTTTATG AATTTGATTC 000960
000961 CTTTGATTTT GATTTTGACA TTGTCTGGAC CAGTGGTATA GTTGAGTCTG TATTTCCATA CTATGATCTA TAACCATTCA 001040
001041 TTCTCTTTGC AGGCCGAGCT CAAGGGAGCA GAACTAAGat taggttccac tttctttgct agatgctgag atacaaagat 001120
001121 aaatgagatt tggtctctgc cctcgaggag ATACGTGGCA AAATAATATG GTAAGTTCTA CAAAGTTCTA TACAAACACA 001200
001201 GATTAATATG CTATTCATGT TTTATTAGCC ATTGCCAAAG AAGGGATGAA GAACTGCAAA AAGATAAaac acagaatact 001280
001281 tgtacttcag gtccttgcca atatctactg cccaactttt acaaaaaaaa ttgctgaaag gcatgaaata tatgaatgcc 001360
001361 tttctaaagc acatgtggat aatctatact tctggagcat ctatgattta ttttcagaac aatccaagtt attagaaagg 001440
001441 taaatatgtt ggtgacattg tttagaagtt cctcaagcag aattgccttt actatgcttt gacattatgc tctcagctta 001520
001521 tatacagtaa ttctatgtga aacagtagcc agcttacaca acctgctcta tatctactac agagctgtta ctaaagtgtt 001600
001601 ggtcaacata taacttacta tttcttatat aaagatgccc aagaaattta gatttcatag atatatcccc aaaagcattt 001680
001681 ctttcaatac cagtttaatg aattgaactt tcatacctca cttaaatcaa cccagggtaa agtggtatgt tctgttctta 001760
001761 cacacaatga aaatcatgta actaattaaa gttagcattt attttagcta ctagggatgc cagagtcaaa ttaacagctg 001840
001841 aaaatgaata actacataag accttaagcc ttttatatct tttctttttt tttaatcacc ttaactactg caattttggt 001920
001921 ttcttaggta atgataatat tattttcttt taattatttg ttttaatgtg tgacctcatg taaatgtcct cataaaatca 002000
002001 gaagtggagt aaataaataa ataaaGTAAA TTTCTCTACT TTTTGATTAT TGGGTGAGTG TATATGGTTG TTTTATAAAT 002080
002081 TTATTCTAAA TAGGATACTA AAATACAGAA AATGTATCAT CTAATTAGCT ATGAAGATAA AAATCTAAAC TATAATGAGG 002160
002161 AAATATTAAA ATGTCAAGAT GACGAAGAAA TTTTTCAGTT TATATAATTA TAGATCAGCT TAATTTCAAA CCACTTTGTT 002240
002241 ACCCTATTGC TATTTTTATA CTCTAAATAG TGTCCCTTAT ATGACTAAGA CTTTTTGTTA TCTCAGAGAT TGGAAGTGTT 002320
002321 AATTGTCCAC CTTGTTAGAA GACATGGTAA CTATAGGAAT TTAGAAAGCA TGATAGCCCA ACTGTAATGA ATATATTCTA 002400
002401 GAATGAGGTT GTCACAAAGA AACTGAAAAC AAGAATTTCC TCTAACAACT GAGCTCAGGA TTCTTTTCAG AGGAAAATTT 002480
002481 AGCTTGCATA AATTCTTGCC ATCTTGGCTC TAGTTGACTT CTTGCTCTCA ACTTTTGCAA AGTGAGATCA CCTTTACCTC 002560
002561 TTCAACCTAT GAGGCCAACA TGTTACTTTC AATTTTTCAG GAAAATCTAC GTCTTGTTTG GCTGAGGTTT GATTATTATT 002640
002641 CCTTAACTAA AATATTTTAA TGTAGCTGTG CTTTTTAATT TGAATATTGC TATTGATTCA AACATTGGGT AGCATATCTT 002720
002721 TCAAATGTGA AATTTTAAAA CATGTATTAA AGACAAACAT AAATTAGTTT TGGTATAACT ATTTTTTAAG ATTAATCCAA 002800
002801 TGCTTTTTTG GCTTTAGATG ATGTTTGGTA ATTAGCTATA TTCAAAAGTC AACCTTTTTT TTTTTTCAAA AAATGAACTC 002880
002881 CTATGTATAT GAGTGTTATT TTTATCTACC CATGTCTTTT TTGTCTACAT ATACAGTTTT AATCATTGTT TCGGGGGGAG 002960
002961 GAATAAGAAT GATTTTGAAA TTTCACTAAG AAAGATATGC CCTCTTCCTA AAAATACATA TATACAGATG TTTTGCTCAC 003040
003041 AGCTCAGGTA TTCATGGATC TCTGGAAGTT CATTTTTATA ATCCCAAGGT AATCCAAAGA GCCTGCTAAA AAATTCTGCT 003120
003121 GTAAATGCAT GGTACATGAT CTCATTCCCT GTTTTACAAC GAAGTATTGA ATGGCTTAAA CTCCTACttt tttttttttt 003200
003201 tttttttttg agatggagtc tccctctgtt acccaggctg gagtgcagtg gctcgatctc tgctcactgc aacctctgcc 003280
003281 tcctgggttc aagcgattct cctgcctcag ccttctgagt aactgggatt acaagcacat gccatcaggc ctggctaatt 003360
003361 tttatttttt ttttgtattt ttagtacaat cagggtttca gcatgttggt caggctggtc tcgaactcct gacctcatga 003440
003441 tccgcctgcc ttggcttccc aaaatgctgg gattacaggc gtgagccaac gcgcctggcc AACTCCTACA TATTTTAAAG 003520
003521 CCACCCCATT AGTTTTCTAT TTTTTTCCCC TTGGAGATCT TCCTTTAGGT CATTTTTACC ATCTGATATC TCAAAACTAA 003600
003601 GCCAAGGCTG AATGTGCTGA AATAGGATTA GAGAGTACAG TAATAGGATA ATTAGATTTG ATTAGAAAAT GACTGTGTGG 003680
003681 GATTTTGTCA ACAGTGAAGA AATGATCTAA GTATGTGGAC TCCTAAGTGA ATTGAGCATG ATGACACTTT AGTGTAGTTA 003760
003761 ATGATCTAAT GCTGGTCTGG TTGATGAGTC CCATTGAAAA TGAGATGCTC TGTTTTCTGG TAAACTTTTC TGCAAAGAAA 003840
003841 AATGTACTAA ATGTTTCAGT TCAGAGTGTT CTATTTAAAT GAAATTTCAT TTAATTGCTT TTAGTTTTAC TGCCCATAAG 003920
003921 CCTTCAGTTG TTTCATTTAA AGTGTACTTT AAGCCCTCCA CTATATTCAC TGTTGAATCT AATGAGTATG AGAGGGTACC 004000
004001 TTGGGCACAA TCTCCACGAA TGTATGAGCC ATAACTACAG TATAGTATAT AGAGATTAGC TTAAGTTATT TTGCTCTGCT 004080
004081 AAAGATAGAG AAACAAGAGC AGTTttctaa cataatgtat gcttctgtaa taggactcag ttaaaaaata attggcaaat 004160
004161 aggaatgtca atgaaatgtg gaaatcaatt gttttataca tgattttccc caatacgtta atgttttgaC TACCAAGTAA 004240
004241 AAGCAGTTGC ACTCTAAGTC CACTAACACA GCTGAAGGTA GTAAGCTGTG GAGGAAAGTA GTCCTATATA TAACACCCAT 004320
004321 TCACTCCTCC TTTTTCCTCT TGGCTTAATT TCACCATACG ATCTGTCTTG AAAATGCTTA TTGCACAATT CTTCCTGATC 004400
004401 TTTGTGCATT TGTCCTTGTT TTTGTAACTC AACCTTTGGT TTATTTATTC CATCATTCTT TCCTAACTCA AACAAATTTG 004480
004481 TGAAGTTCTA AATGTATTGA AATATATGTC GTAACTTTTA TTTTTAATTG TGCTAGCATT TTCTTAGCTT TGTAAATGTT 004560
004561 TTTTGCAGTG CTATGGTTGT GATGTTATGT AAGTTTTACA CTTTTTTCTC CAACATAATT TTTTCCCGAA ATATTGCCAG 004640
004641 TTATTTTTGT TATTGaatag acttaatttt cttagagcag tttcaggatt acagaaaagt cagagagtac agaaagttcc 004720
004721 catatatctc ccatcccttt tctcacagtt tcacttgtta ttaacatctt acattagtgt ggtacatttg ttaacaattg 004800
004801 ataaaacaat tttgttacat tattattaag tacacagttt acactagagt ttattctttt tgttggtcag ttctatgagt 004880
004881 tttgaatagt gtataatgtc atatattcac cattatattg tcatgcagaa tagtttcaca tttctgaata tcccctattt 004960
004961 atcccttcct cttcccctca caaacccctg gaatccattg atctgaaact gtcttgcagt tttctctttt ccagaatgta 005040
005041 tgtatagagt catacagact ctgttgccct ttcaaactgg cttctttcat ttaacaacac gcatgtaagc atccttcatg 005120
005121 acttttcatg gcttgatagc tcatttattt tttattgttc aataatattt cattgtatgg atatgccaca gtttatttat 005200
005201 ctatatatct gttgaaagat atctcggtta cttccaattt ttggcaatta tgaataaaga tactataa
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Predicted Small Protein

Name NONHSAT042331_smProtein_3212:3439
Length 76
Molecular weight 8415.609
Aromaticity 0.16
Instability index 55.7908
Isoelectric point 5.97662353516
Runs 13
Runs residual 0.0243971631206
Runs probability 0.0942141236258
Amino acid sequence MESPSVTQAGVQWLDLCSLQPLPPGFKRFSCLSLLSNWDYKHMPSGLANFYFFFVFLVQS
GFQHVGQAGLELLTS
Secondary structure LLLLLLLHHHHEEELHHHLLLLLLLLLEEEEEEEELLLLLLLLLHHHHHHHEEEEEEELL
LHHHHHHHHHLLLLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHH
HHLLLLLLLLLLLLL
PiMo iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTT
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