NONHSAT042358

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT042358

Source

NONCODE4.0

Same with

,

Classification

sense

Length

864 nt

Genomic location

chr15-:49164210..49169478

Exon number

2

Exons

49164210..49164339,49168745..49169478

Genome context

Sequence
000001 gcttgttttc ctgcaactag atggtcccat ctgggggtga tgagacacag tgacacccga ggtgtgttcc ttatgtccgg 000080
000081 tctattctgt aatctcattt tggttgctgt tactgtggaa aatcctgcct cacaaagata ggatgttgaa aatggaagga 000160
000161 ggcttttcag tacttttgtg gcaatctcag gatgttccgc cttgacttta atcgagaacg tatggagatt tgaagttgtc 000240
000241 tcaaacatac ttttaaggcc accgtcattt gcaatatcaa gcagttgatc ctcttctagc gtggacaaag tggattcacc 000320
000321 tggcttattc acaaatgggt cacagatcca ttccgtcttt tgtggatgag aagtgtgatg gttaatactg agtgtcaact 000400
000401 tgattggatt gaaggataca agtattgatc attggtgtgt ctgtgagggt gttgccaaag gagattaaca tttgagtcag 000480
000481 tgggctgcga aaggcagacc cacccttaat ctggttgggc acaatctaat cagctgccag cttggctaga atataagcag 000560
000561 gcagaaaaat gtgaaaagag agactggcct agcctcccag cctaaatctt tctcctgtgt tggatgcttc ctgccctcga 000640
000641 acattggatt cccaagttct tcagtttcag aactcggact ggctctcctc tctccttagc ctgcagacag cctattgtag 000720
000721 gaccttgtga tcatATTATT GCAAATCATC ATATGCAGTC TATTTCATTT GCCTCTGGAG GGGATCCTGT AAGTATGGAT 000800
000801 TCACAGAAGT TCTTTTTATG AGTTAAAATA ACTTCTTGAC ATTTGGGGCT GGATGATAAT AAAA
[back to top]

Predicted Small Protein

Name NONHSAT042358_smProtein_623:820
Length 66
Molecular weight 7257.3393
Aromaticity 0.107692307692
Instability index 54.2046153846
Isoelectric point 7.89556884766
Runs 7
Runs residual 0.0425961538462
Runs probability 0.0209579327227
Amino acid sequence MLPALEHWIPKFFSFRTRTGSPLSLACRQPIVGPCDHIIANHHMQSISFASGGDPVSMDS
QKFFL
Secondary structure LLLHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLEEELLLLLEEEELLLLLLLLLLL
LLLLL
PRMN -
PiMo -