NONHSAT044099
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT044099 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
1802 nt |
Genomic location |
chr15+:58444805..58446606 |
Exon number |
1 |
Exons |
58444805..58446606 |
Genome context |
|
Sequence |
000001 ATGCTCTTAT TATACCACTA TTATAAAAAC ACTAGTTCCC TTAATCTTAC CAATTATTAC TACCTTAGCC AACCCCTGCA 000080
000081 AAAAAGATTG ATACCCATAC TACGTAAAAA TATCTATTGC ATGTGTCTTT ATTACTAGCC TCATCCCTGT AACAATATAC 000160 000161 ATATTCATAG ATCAAGAAAT AATTATCTCA AACTGACAGT AACAATTCAA ACTCTTCAAC TCCCACTAAG CTTCAAACTA 000240 000241 GACTACTTTT CCACAATATT TATCCCAGTG GCACTATTTG TTACCTGATC TATTGTAGAG TTCTCAATAT GATATATAAA 000320 000321 CTCAGACCCT AATACTAATC AATTTTTCAA ATATTTACTC ATTTTCCTCA CGATAATATT AATTCTAGTT ACCACCAATA 000400 000401 ATCTCTTCCA ACTTTTTATT GGATGAGAAG GTGTGGGAAT TGTGTCTTTT TTACTAATTG GCTGATGATA TGGCCGAGCA 000480 000481 GATGCTAATA CAGCAGCCCT CCAAATGGTC CTGTATAAAC GATTGGCGAT ATTGGCTTTA TTTTAGCTAT AGCATGATTC 000560 000561 CTCTTATTTT CCAACACATG AGAGCGTCAA CAAATATTTA TTCTAAATCT TACCCCCAAT TCCTTTCCAC TAATTACTGT 000640 000641 TCTCCTGGCA GCAGCAGGAA AGTCAGCTCA ATTTGGCCTT CATCCCTGAC TTCCTTCCAC TGTAGAAGGC CCAACCCCAG 000720 000721 TTTCAGCCCT ACTCCACTCT AGCACTATAG TTGTACAGTT TTTCTACTTA TCTGCTTCTA CCCTTTAATA GAAAATAATC 000800 000801 TATGAATCCA AACCTTTACA TTATGTGTAG GGGCATCACC ACATTATTAA CAGCAATTTG TGCTCTAACA CAAAATGACA 000880 000881 TCAAAAAAAA AATCGTAGCA TTCTCCACCT CAAGCCAACT AGGCCTTATA ATAGTCACAA TTGGTATTAA TCACACCTAG 000960 000961 CATTTCTTTA TATCTGCACC CATGCCTTTT TAAAAGCTAT ATATGTTCAG GATCCATCAT CCATAATCTC AGTGATGAAC 001040 001041 AAGACATCTG AAAAATAGGA GGACTATTCA AGACTCTACT CCTCACTTCC TCCTCCCTTA TCATTGGCAG CCTCACACTT 001120 001121 ACAGGTATGC CTTTCCTCAC AGGCTTTTAT TCTAAAGACC TCATTATTGA AACTGCAAAC ACATCATACA CCAACGCCTG 001200 001201 AGCCCTTTCT ATTACTCTTA TCGCAACCTC CCTAACAGCT GTCTATAGTA CCCAAATTAT TTTCTTCGCT CTGATAGGAC 001280 001281 AACCTCGCTT CACAACTGAT TATTATTAAC AGAAATAACC CTTTCCTAAT TAACCCAATT AAGCACCTAA TAATCGGCAG 001360 001361 TATCTTCGCT GGATTCCTCA TTACCAATAA TATTGTTCCC ACTTCATCCC CCTAAACAAC TATGCCACTT CGCCTAAAAC 001440 001441 TCACAGCCCT AGGTGTGACC ACCTTAGGCC TCTTACTAGC AATAGAACTA AATTTTATAA CTAATAACCT TAAGCTAAAG 001520 001521 TATCAATTAC AGACTTTTAA ATTCTCCAAT ATACTAGGTT TTTACTCAGC CACCATCCAC TGTACAGCTC CCCCAACTCA 001600 001601 AGTCTATTTA CAAGCCAAAA TCTGGCCTCA CTTCTACTAG ACATAATTTG ATTAGGAAAG TCCATACCAA AAACCATTTC 001680 001681 ACAAACTCAT ATAATCAGCC TCCATTACCA TACCTGCCCC AAAAGGCCTA ATGAAACTCT ATTTCCTCTC CTTTTTTATT 001760 001761 TTACCTCTTC TAACTCTAAT CTTAATTACC TAATCATCAC CC |
Predicted Small Protein
Name | NONHSAT044099_smProtein_1421:1639 |
Length | 73 |
Molecular weight | 8242.7393 |
Aromaticity | 0.138888888889 |
Instability index | 45.8377777778 |
Isoelectric point | 9.73187255859 |
Runs | 9 |
Runs residual | 0.0159164639092 |
Runs probability | 0.0483326463719 |
Amino acid sequence | MPLRLKLTALGVTTLGLLLAIELNFITNNLKLKYQLQTFKFSNILGFYSATIHCTAPPTQ VYLQAKIWPHFY |
Secondary structure | LLLEEEEELLLHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHLLLEEEELLLLHH HHHHHHHLLLLL |
PRMN | - |
PiMo | - |