NONHSAT047334

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT047334

Source

NONCODE4.0

Same with

,

Classification

sense

Length

4820 nt

Genomic location

chr15-:75650076..75655518

Exon number

4

Exons

75650076..75653532,75653627..75654061,75654196..75654288,75654684..75655518

Genome context

Sequence
000001 AGGAACTGCA GCCTGGGAGT CAGGAGAGGC TGTAGCACCT CTGGTAGGAC AGCTGGCTCC ATCCTGGGAG CCATGCCTCT 000080
000081 GTTCCCAGGT ATACATCAAG TTTGTGCAGG GGCAGGGTAG TCCCTGCTAC TTCTCGTAGG ATCCTCTAGG GGATGTCTAA 000160
000161 TTCCCCAAGA GGACTGAGGC TATTCTGGGG CCTGGAGCCT CCATTTCCTG ACCTGTATAA TTGGCCTCAT AGCACTGCCG 000240
000241 CCTCCTTTCC CCAGCCCCTC CTCCCACCTC GCTGGAGTGA AGTGAAGTGA CCACTTAGGA GGGACACCAC AGGGCTTTCC 000320
000321 AGGGTGAAGG GCCTGGGATG GGAGGGGGGC TAGGTGACCC TCTGGAGTCC CAGCCCAGGC CTGGTCAGCC TTGCTGCTCC 000400
000401 CTCTGTCCTC CACCTCACTC CCCGTATAGC CTGGCTTTGG CCCTTCAAAG AGACTGTGAG GAAATGTGCC CGGAGCTGGG 000480
000481 TGACCGCCCT GCAGCTCATG GAGCGGAACC CTGAGTTCAT CTTTGCCTGC TCCCAGGTCA GAGGGACAGC TGTGAGGGAG 000560
000561 GAGGGAAGCA CGTGGCCCTC CCTGGAGCTC CACAGGCCCT GAAGGCTTCC CAGGCCTGGG GTCAGGGCTG CTCCTCACCC 000640
000641 TCAGCCACAC ACTGAGTCCC ATATGCTCAG TCCTGGGTGG GGCCCTTGTC ACTCTGGTCC CAGCTCCCTT CAACCTGCCC 000720
000721 ACAGGCGCAG CAGCTGGAAT GGGTGAAGAG CCGCTACCCT GGCCTGTACT CCCGCATCCA GGAGTTTGCG TGCCGTGGGC 000800
000801 AGTTTGTGCC TGTGGGGGGC ACCTGGGTGG AGATGGATGG GAACCTGCCC AGTGGAGAGG CCATGGTGAG GCAGTTTTTG 000880
000881 CAGGGCCAGA ACTTCTTTCT GCAGGAGTTT GGGAAGATGT GCTCTGAGTT CTGGCTGCCG GACACCTTTG GCTACTCAGC 000960
000961 ACAGCTCCCC CAGATCATGC ACGGCTGTGG CATCAGGCGC TTTCTCACCC AGAAATTGAG CTGGAATTTG GTGAACTCCT 001040
001041 TCCCAGTAAG CAGGCCCCCG GGGGGTCAGG GTCAGAGTGG GCCTCAGTCC CGCCTGGCCC ATTTGCCTCT CCCCCTTATT 001120
001121 GTGGGGTCCT AGACAGACCA CCAAACCCTC ACTCTGCCTC TGCCAGGGTC ACATAGCAGG CAGGGGCAGG ACCAAGTCTG 001200
001201 GAAGGCCTGG CTCTGCCTCA GCCCTGACTC TGGCCTCTCT GCCCTGCTTC TGTTTCCCTG CTGGTAGCAC CATACATTTT 001280
001281 TCTGGGAGGG CCTGGATGGC TCCCGTGTAC TGGTCCACTT CCCACCTGGC GACTCCTATG GGATGCAGGG CAGCGTGGAG 001360
001361 GAGGTGCTGA AGACCGTGGC CAACAACCGG GACAAGGGGC GGGCCAACCA CAGTGCCTTC CTCTTTGGCT TTGGGGATGG 001440
001441 GGGTGGTGGC CCCACCCAGA CCATGCTGGA CCGCCTGAAG CGCCTGAGCA ATACGGATGG GCTGCCCAGG TCAGGCCAGG 001520
001521 CCTTGGCTCT CCTTTAGCCC CACCCTGGGC CCTTGCCATG AGCCCTGCCT TCCCTCAGAC ATTGGGCCCA ACCCCTCCTC 001600
001601 TGGACCTTGT CCTGTCCCAA TCCTAGACCA CGGGTTCCTC CAAACTTCCA CCCTGGGGGT GGGTGGGGGA GAAGCTGAAG 001680
001681 CTGGTAAGGG CTCCAGCCCA TCAGAGAGAG AGGCTCTCCT AGGGCGTCCA GGGCTGGCCA TCTGTGAACG GGGAGCTTTC 001760
001761 TGGAGTGGCT CCTCTCTGTA GGAGCTGGAT CCTTTGCTTT GGTGTGGAAG AAGGGTGAGC CATGTGGTCT CCAAGGCTGG 001840
001841 GAGACCTAGG CTTGTGGTCT CCTCAGGGTG CAGCTATCTT CTCCAAGACA GCTCTTCTCA GCACTGGAGA GTGACTCAGA 001920
001921 GCAGCTGTGC ACGTGGGTTG GGGAGCTCTT CTTGGAGCTG CACAATGGCA CATACACCAC CCATGCCCAG GTCAGGGGGA 002000
002001 GGTTGCAGGG CTGTGCAGGG AGGGTGTGCC CTTGATCTGC AGAGGGTCAG AGAAGGCAGC AGGGGACAGA GCCCAGGCCA 002080
002081 GATCTAGGGG AAGAGAAGTT TGGAGGAGAG AAGTTCAAGA CCTGGGTTGG TCAAGAAAGC TTGAAGGAGG CAGAAACCCC 002160
002161 TGAAGAAAGA AGGGTTTGGG CTGCGGGGAG AAGAGGGAAG GCATTTAAGG CAGGTCACCC GCCAGAGGCC TTCTCCACGA 002240
002241 GGCCCTTGGT GAGTCCTCAG GGATTCTGAG CAAGGGAGGG CTTTGGAAGG TGTCCTGGGA CAGCTAAGCA GGCTCCAGAC 002320
002321 TAATCTTCCC ATCCTGGGCT CAGATCAAGA AGGGGAACCG GGAATGTGAG CGGATCCTGC ACGACGTGGA GCTGCTCAGT 002400
002401 AGCCTGGCCC TGGCCCGCAG TGCCCAGTTC CTATACCCAG CAGCCCAGCT GCAGCACCTC TGGAGGTCAG CCCAGTTCTG 002480
002481 TCCCTGCCAT CCACCTGACT GCTCACTGCA GTTACCTCTG TGCCTGCCCC TCCCAGCCTT CCCATCCCTG CCCTTGGCCC 002560
002561 CTGCAGGCTC CTTCTTCTGA ACCAGTTCCA TGATGTGGTG ACTGGAAGCT GCATCCAGAT GGTGGCAGAG GAAGCCATGT 002640
002641 GCCATTATGA AGGTTAGGCT CACAATAGTC CTGCCTGCTC TCTCCAACCC CAGGGCTGAG CCCAGAGTGT CCCCTGTGGG 002720
002721 ATACCCATGG GCACATTCCA GACCTGTTGC CCACCTATGA CCAGCCAGTC TTTCCTCAGA CATCCGTTCC CATGGCAATA 002800
002801 CACTGCTCAG CGCTGCAGCC GCAGCCCTGT GTGCTGGGGA GCCAGGTCCT GAGGGCCTCC TCATCGTCAA CACACTGCCC 002880
002881 TGGAAGCGGA TCGAAGTGAT GGCCCTGCCC AAACCGGGCG GGGCCCACAG CCTAGGTACG AGCTGAGGGG AAGGGTTGCT 002960
002961 ACTGCAGCAG GAAGGATGGA GGCCAGACAG ATCAGGCCTG GGATACCCCG AGGGATCTGG GTGCCCCTGA CTGGAGAGTA 003040
003041 GTAGCACATC TTCCACCAAC CCATCCCCAC CTGCGCAAGC TTCCTGAAAG GTCAGGAAGG CTGCACTGAT GCCCAGGCCT 003120
003121 CACCCCCAGC CCTGGTGACA GTGCCCAGCA TGGGCTATGC TCCTGTTCCT CCCCCCACCT CACTGCAGCC CCTGCTGCCC 003200
003201 CAGCAGCCTG TGTTCGTAGT GCAAGAGGTG AGTCCTGCAT GCCCTGGGGG GCAGGAACTG TGCTGGGATA CTTTCTTACA 003280
003281 ACTGAGGGTC CTGAGCTCCC CTGTCTGGAG CAAGTGGTGA GGCGGGGCTG GGGTTGGGGT GGGAAGACTT TTGGTGTGGG 003360
003361 AAGCCCCTAC AGACTCAGCC TCAAGGCCTC CTCCCACAAA GACTGATGGC TCCGTGACTC TGGACAATGG CATCATCCGA 003440
003441 GTGAAGCTGG ACCCAACTGG TCGCCTGACG TCCTTGGTCC TGGTGGCCTC TGGCAGGTGC CAAATCCTCA TTGCCCTTTC 003520
003521 CCAGTGCCTG GCAAGTAGAC CCCAGGCCAT TTCCTCTCTC CCCTTGCCAC AACACTGCCC ACAGCAGCCC ACCAGTGGCT 003600
003601 CTGGGCTGGA ACCCACACAT GGAGCAGGGC AGGCTGGGCA GTAGTCCCCT GTCCACTGGG TCTACTCACT CCACCCTACC 003680
003681 CCACCAAGAG CAGCTGGAGA CAGCGAGGTC AGTTGGTTGT ACAGCACCAA TCCCATGTCC TTCCAGGGAG GCCATTGCTG 003760
003761 AGGGCGCCGT GGGGAACCAG TTTGTGCTAT TTGATGATGT CCCCTTGTAC TGGGATGCAT GGGACGTCAT GGACTACCAC 003840
003841 CTGGAGACAC GGTATAGGCT GGGCAGCATG TGGGGATGGT GGAGGTGGTG GGAACACAGG CTGCTCTGGA TCAGTATGTC 003920
003921 CACCCCTGTC CCATAGGAAG CCTGTGCTGG GCCAGGCAGG GACCCTGGCA GTGGGCACCG AGGGCGGCCT GCGGGGCAGC 004000
004001 GCCTGGTTCT TGCTACAGAT CAGCCCCAAC AGTCGGCTTA GCCAGGAGGT TGTGCTGGAC GTTGGCTGCC CCTATGTCCG 004080
004081 CTTCCACACC GAGGTAGTCG GGGGGTAGGG GGTGGCTGTT TTCCCCAAGT GTGCTTGGTA AGGAGGGGCC AGCCCCAGGC 004160
004161 CTTGGTGTGT CTCTTCCTTC CCTGACTCCC ACCCTCCTTC CCACTCCCAG GTACACTGGC ATGAGGCCCA CAAGTTCCTG 004240
004241 AAGGTGGAGT TCCCTGCTCG CGTGCGGAGT TCCCAGGCCA CCTATGAGAT CCAGTTTGGG CACCTGCAGC GACCTACCCA 004320
004321 CTACAATACC TCTTGGGACT GGGCTCGATT TGAGGTCTGA CATGGCAGGG TGGGAGTGGC CTTGGACTCC TCCCTGGCTG 004400
004401 GGGAGACTGC TTGTGTGGAA CAGGCTGGGG AGGAAGAGGa taatcaacat ttgctgcttc ctaacgtgtg tgccaggcat 004480
004481 tgcactaaat gctttacatt ggcaaggcac agtggctcac gcctgtaatt ccagcacttt gggaggccga ggtgggtgga 004560
004561 tcacctgagg tcaggagttc aagaccagcc tggccaacat ggtgaaacgc catctctact aaaaatacaa aaattgggcc 004640
004641 gggcgtggtg actcacgcct gtaatcccag cagtttggga ggctgaggtg ggtggatcac gaggtcaaga gatcgagacc 004720
004721 atcctggcta acacgatgaa accctgtctc tactaaaaat acaaaaattt agccgggtgt ggtggtgggc gcctgtagtc 004800
004801 ccagctactt gggaggctga
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Predicted Small Protein

Name NONHSAT047334_smProtein_4283:4567
Length 95
Molecular weight 10303.9141
Aromaticity 0.0851063829787
Instability index 41.1925531915
Isoelectric point 9.13299560547
Runs 12
Runs residual 0.00115633672525
Runs probability 0.0429105576164
Amino acid sequence MRSSLGTCSDLPTTIPLGTGLDLRSDMAGWEWPWTPPWLGRLLVWNRLGRKRIINICCFL
TCVPGIALNALHWQGTVAHACNSSTLGGRGGWIT
Secondary structure LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHEEEEEELLLLLEEEEEEEEE
LLLHHHHHHHHHHLLEEEEEELLLLLLLLLLEEL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHH
HHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLL
PiMo iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTT
TTTTTTTTTTTooooooooooooooooooooooo