NONHSAT047418
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT047418 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
981 nt |
Genomic location |
chr15-:77333726..77335144 |
Exon number |
2 |
Exons |
77333726..77333740,77334178..77335144 |
Genome context |
|
Sequence |
000001 TCTCCATGTA CATACCCTGT TCCTCATGAG ACTCTTCCCC ATTCCCCGAC CAGGTTCAGC AAATGTTGCT GATTCTGGCC 000080
000081 TGATTCAATC TTTATGATGA CTGCCAAGCG ACGTTTCTGC AGCCCAGCAC TCCTTCCTCA TTTGCCAGTC ATCCCTCCCT 000160 000161 TCTCCTTCAT TTATTTTCAT ATATCCACTA TGGATTCCCA TTTTTTCAAA AGTCGACTTC ATCATTGACC TTTGGGGATG 000240 000241 GGGGAAGAGT TCCTCAGATA GTTCCCGACT TGGCCAGCGA GAGCCCCTTC GAGTGCCTCC TATATCCCAG CATTTTTGGA 000320 000321 AGCACTCCCC TAATTTCTGA TCTAACAAGA TGTTCCGGGC CCCTGGGCAC CAGCCATGGA TCAGTGTTTG TCCCAGGAGC 000400 000401 CCTGGTCCCT GGCACTAGGT GTGCTTATTG CAGCTGGGGT GTCTTTGCTT CTTGTCCTAT AGATGATTGA CAGAGCTTGT 000480 000481 CTTACTGCCT TTTTTAAGTG TATTTTTTTA AACAAAAGTA ATTGGTGCTT TAAAAAATGT GAACAATACA GACATCTGTA 000560 000561 AAGAAGTACC CACAGGGAAG CAAGTTCAGC AGTTCAGCAA TGGCATGTGT CTTTGCAGAC TACATACACA GAAACAGACT 000640 000641 TGGTATTGGG TTTTGGTTTT TGCTTTTTGC TAATAGGAAT TTTATCCTAC AAGATCCTCT TTCTGTCTTC ACAACATAGT 000720 000721 CTGATGCTCC TTCCATGTCT AACTGTAGGA TTTGTCATTC CATTGTGTTA GCTGTGTGGG TACATTAGTA CCATGATTAA 000800 000801 CCAAGGTGTA TAAAGGGCAG GCCTGCAGGC TGCCTCCAGT GCCTCCACTA CTCGCCACAG TGATCATCTC TATACACACA 000880 000881 CTGCAGTCAT TTACAATTTT TAAAATGAAA ACAATTTTTA TTGAGATGCA ATTCACATGG CATAAAATTA ACGATTTTAA 000960 000961 AGTAAAAAAA AAAAAAAAAA A |
Predicted Small Protein
Name | NONHSAT047418_smProtein_599:718 |
Length | 40 |
Molecular weight | 4608.3477 |
Aromaticity | 0.205128205128 |
Instability index | 41.7615384615 |
Isoelectric point | 7.99884033203 |
Runs | 6 |
Runs residual | 0.0148944193062 |
Runs probability | 0.0434552199258 |
Amino acid sequence | MACVFADYIHRNRLGIGFWFLLFANRNFILQDPLSVFTT |
Secondary structure | LLEEEHHHHHHHLLLHHHHHHHHHHLLLLLLLLLLLLLL |
PRMN | LLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLL |
PiMo | iiiiiiiiiiiiTTTTTTTTTTTTTTTTTTooooooooo |