NONHSAT047442

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT047442

Source

NONCODE4.0

Same with

,

Classification

sense

Length

3558 nt

Genomic location

chr15+:77774392..77777949

Exon number

1

Exons

77774392..77777949

Genome context

Sequence
000001 ggagaaacat cttgcttgaa aatatctgcg tagatgagta cagaatccaa gactagaacc acagatatct aaactctcTC 000080
000081 ATTCACTGGG TTTCTAAAAC ATTGCTCTAA GGAAGAGGTG GATGGGGGAA GGGGAAAGCA CTAAAAAATC CTGAAATAGA 000160
000161 GCATTAAGAT ACATAGGAAG TAAACAGATA AAAATTGTAA TCCAGGAATT ATAATGTTAT AGAATTTTAG CTCATTTTAA 000240
000241 AATTATTTTG ATAAATATAC AGTGGAAGAA TTACCCTACC TGTCTGTCAC CTTTCTTGTA GCTGAGTAGT ACCTAGAGAC 000320
000321 AAGTGGAGCT AGGAGGAGGC CATGAGGGTG ATTTTAAGTT GAAAGGTGAC TACCTTATAT AAACTATTAA AATGCATATG 000400
000401 TTGCCTGATT TCAATGATAA TATTTGGCTG TTTGAGTTTA GGGAAAAAAA ATCTTATGTG ACTGTATTTT TATTAATATG 000480
000481 AGAAATGTTC TTGATTATAT GCACATAATA CATCTCTATA CATGCAGATA TCCTTAGTTA ACACTTGAAG AAAATTGGTT 000560
000561 TTGATTGACC ATACATTCTT CAGACTAAAG TAGGGTACTC ATTTTCCCTC CTCAGGTTTG TCCCTGATAG TTGCTTTTCT 000640
000641 GTGTTTAGCT GATGATTTTC CTACCTCCCA TTGTTGCTGA ACTGGAACAG GGCCATGTTT CTCATTGAAA TGTTATGTAA 000720
000721 AACATCTCAA TGAGGTTGCC TGCTTACAGC TTTATGAGTT CTTCAGTTTA CATACACCCT GCACTCACTT TAACGCTTAT 000800
000801 GAAACCAAAG CATTTTTAAA ATCCATAGCG CTAACCCCTT CCATTCAATA CTTACTTTCT TGGTGTTATT TTCCTTGttt 000880
000881 gtttttgttt ttgttttgtt ttgttttCCT GATTCTACAG GTCTTAGAAC TCCAAGATGT TCCATAAGTG TTTTTACTTG 000960
000961 TGAGGAATGA GAAGCCATCC ATGGAAATTT GAACTGAGTG GGGGCAGAGA AAGAGTGCAG ATCCCTTTGC TTGTGAAAGA 001040
001041 ATTATCAGTG AGTGAAAGGC CATCACCCCA GGAAGCCAAA TGAGGGAGCA GCAACATGTA TATGAGCTTC CTATGGAATT 001120
001121 GTCCTTATGT GAAGCTTTGA AGGTGTACAG CCACTCTCCC GGGTCTTCAG GTTCCTACCA TTTCCATTTC TGTTAAAGTG 001200
001201 GATCTGCATA TCTTCAGCTT ACTAGGTGAC CCGGATGCTG ACATCTGCTG CTGCAGAAAG GAAGACTTTT CATTGTAATT 001280
001281 TCGCTTAGAC CCTTTTATCA GTGGAGCTCC AGTTTTCTTA CCTAGCTGTC ACTTTTTTAA ATGCCTCTGG GGGTTATTTT 001360
001361 TGCTTTCCTT GGCCCCCACC AATTTATACA TCTCCATTTT CTGACCTCTG GACTAACTGG TTGCTCAGCA AGGTTCTGAA 001440
001441 GGAGAGTTTC TTGCATTGGA CAGGCCCAGT CTTCTCCCAT CATTGCCCTG CTGTGACTCC AAAGAAAGGA GCTTCTTGCT 001520
001521 GACAGTGCCC TGTGGAGCAA GGCTGTGTTT CCTACCCCAC ACGGTGCTCA GTGGGTGCCA GCCCTCAGTG TGGCTTTGTG 001600
001601 ATTGCTGCCC TAAAGGAGAA TGCTCTTTCC TTCCTCACTG GTACTGCCTG CTGTTTTCTA AGCATTGCTC CTGCACAGAC 001680
001681 ATGGAGTCCC AGCCCCAGCA AGGCTCTTCT GTTCCCATCT GTTGACAATG TCTTGTGGAG CATTTTTGCT GAGGAAAAGG 001760
001761 TCACTTGTAA ACAGAGGAGA AAGGGAAAGA GTACAAAGCC CTAAGTTTAT TGTAAGTGAA AACTGAGGGA ATTCCTGTCT 001840
001841 TCTTTAGGAG TAATGATTCA TAGATCTAGA TAGGTGGAAA TATCATTCAA AATAGTCACT TGAGCTCACA AAAAAAGCAA 001920
001921 GGAAGAATTC TCATGTCCTT TGTCTTCCTT CTGTAGCCAT TAACTGCTGA ATCCATGTGA GGAAGACAGG CTTCCCTTCC 002000
002001 TTCCCCCTCC TTAGTGATTT TTTCTTTAAC AGCATAAGTA AAGAGGACTT TCTGGTTCAT ttttgtttgt tttgttttgt 002080
002081 tttgttttgt ttACagatga ggtcttcctg tgttgcccag gctggagtgc ggtggctatt cacagatgct atcatagcac 002160
002161 actacagcct acaactcttg ggctcaagca tcacgcctag cagtttcTGG TTCCTTTAAC AGCAAAAGGA AAGAGAGGTT 002240
002241 CTGATTCTTA CCTCAGGGTT TTTTGGTTGT TCAttgtttt tgtttttgtt tttgttttGA CACTGCAGAG CACAAGGCTA 002320
002321 AAGGTTACAG CTGAGATCTT TGGAACCAAA GGCAGAGCAA GCAGAGCCCG TTGTCTGGGC CCCACACCAC TGCAGGCAGG 002400
002401 TGGATAGAAG TGCGGCCCCT CTCATAGTAT GCCCATAAGT CAGGGCATAG GGCAGAACTA CCTGTCATGT TGCTACACCA 002480
002481 TCCTGTCTTC TCAGCATCTC CTTGCCTGTT TTCTTTATTA GTCCAAAGGA AAACAACAGC AACAAAATCT GTTTTTAAAA 002560
002561 TGTCTTATAT GAACATATAT CAAATATCCA TGCGCTGAAA CCCACATACC ATCACTTGGC AATTTTTTAG AATAAGACCC 002640
002641 CATTATTATC TATTGCTATA AACCTAGCCA GTTCTCTTGC TCTTCTGTAT TTTCCTATTT CCCTGCCATC ATCTGCTATT 002720
002721 TCTGCCACTT CTCTTAGACT CCTTGTCTGC AAAGCCCAAG CTAGAACTCA CTGTCTATGG CAGAAGGACA TCCAGAGCCC 002800
002801 ATTCTGGAGT TTTGTTTTTT CCTTCTGCCA GATGCTTTGT GTCCTGTCTT CCTTCCTCCT CATATTTCTG TTTCTCATTT 002880
002881 GTGTTCAGTT TTGTGCAGCA TTGCTAGCAC TGCTTTTGTG ACCAGAAAAG GCCATAACAT GGTCCAGGAT CATCATTCTT 002960
002961 CTGACTCTAG ATGGGACACT TGACAGTGAC TTGAAACATT TGCATATTCA GGAATGCATG AGATTTCAAG AGAGCCTACA 003040
003041 GTATGAAATC ATTTTCACAA AATAAGCAGC TTGCTTCTGA AATGCTGTCT TTCCCAGTAG CTACTCACCT GCCTCTGGTG 003120
003121 GCTGGGATTC AGATGCCACA AAACTGTCAG TATCTATAGA CCAGGTCTGT GCCACCTCCT CTCTCCTCTG TGCTCAGTGA 003200
003201 GGAGGCAGTA AATGAAGTTA CAGGCTAGCA CAATACCTAA CTCATGTTTC CCAGTACACC TGTAGATATT ACTGTACTTT 003280
003281 TATGTTCTCA AGAAATAAGT TGTTGCCTAT TCAGTGTTAC AGATTTCTTT GTTTCTTTTT AATTAAAATA CAAGAAGCAG 003360
003361 CTGAGGAAAG GGAGACAAGG TATTTTATTT CTGACTGATT TTAGAAAAAA CTTGTGTACA TGTGTTTGGA ACTGTTGAAA 003440
003441 TGCCAAGTTT TCTGTATAAG TGTTTTTGTA ATTAAACTTT CAGATTTTCT TTGTTTTTTA AGAAGTTGAT GTGCTTGTTT 003520
003521 GACATTTGTC TCATTAAAAC TTTTCTACGT TGAATTCA
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Predicted Small Protein

Name NONHSAT047442_smProtein_2096:2218
Length 41
Molecular weight 4461.1262
Aromaticity 0.15
Instability index 78.7925
Isoelectric point 7.99884033203
Runs 5
Runs residual 0.0530241935484
Runs probability 0.0347641759406
Amino acid sequence MRSSCVAQAGVRWLFTDAIIAHYSLQLLGSSITPSSFWFL
Secondary structure LLLHHHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLEEL
PRMN LLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLL
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