NONHSAT050878

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Basic Information

Transcript ID

NONHSAT050878

Source

NONCODE4.0

Same with

,

Classification

antisense

Length

2356 nt

Genomic location

chr15-:100255902..100273596

Exon number

3

Exons

100255902..100258027,100260989..100261171,100273550..100273596

Genome context

Sequence
000001 ggtcgcgagt cgccggtcgc cggtcgcggC GGAGCCTGGG CGCTGAGgaa agatctagga gagagggaga aattgatgct 000080
000081 gccagaaaga ggggacagtt acagaagcga agaccttgag aaggagatga tgagacccag gatgcaacac agaaggcttg 000160
000161 gacttagata agggcaccaa ggtccctcga cagtgcctgg agggaagatt cctggatatc acgtgagaag CTGCGTTTGC 000240
000241 TTTGGTTAGC TAGAAAGCAG GCCCATCATG CATCTGTAAG AAAGTGACTG GAGTGTAGGC CCTGGCGTCT AAGCCGAGTA 000320
000321 AGATGCCCtg tcaatctggg tcctctggga agcaagactg atgaaatgag gagcaccaaa gctttaCACC CCAGCTATGT 000400
000401 GCATTTGGGG CTGGGGCTGC CTGGGAAGAG CTCGTCCTCA GCCCAAAGCC TGCAACAGCT GGGATCAGGG CTTACCTCTC 000480
000481 ACAGACGGGG CTCAGCAACT TTCTGCGGGA TGAGGACACA AGCCCACTTG ACCTGGAACG TCTGAAACCT CCTGGCCCCG 000560
000561 TGGAAGATGG GAAGAAACAC TCCTCTTCCT CTCAGTTTTA CAACCGAGTG GTCCTCGGGC TGCTTGTGAG CACCGGACGA 000640
000641 CCGACCGAGC AGGCTGCAGC CAATCAGCTG GCACAGGGCT CCGACTGAAA ATCATCTTGG CTGGTGCCAC AGAATCGGCC 000720
000721 TGAAAACAGG ATACTGCCTA GAGCAAGGCA CCCAGGGGAG CCAAGCAGGA AAATGTAATG AATTGACTTT AAGTAGCTGC 000800
000801 AGCTGTGATT AGAGTATTTT TAGCCACAGG ACTCAACCAG CTTTCAAAAC CTGCTAATAA GAGCCCCACC GTAGCCAGCG 000880
000881 CAAAAATTTA GTTTTCAGTT TAACACCAGG AATCTGCTTA GCTAGGAGCT GGCTTAGAAG GCACATCAGG AGAGAACATC 000960
000961 TTCTACTGAA AGTTGAAGAT TTTTCATTTT CTAGCTGAAT TATGACAAAG GGAGATGACC ATTAAGTGCC TGCCAGCATA 001040
001041 CTGGGACGTA CACCTAACAC TCTGAAAACT CAATTCATGC CAGCACATCT GTCTTCTGCT GCATCTAGCT CAGCATCATG 001120
001121 TATGTATTTT GGGCAAAACT AATCATTTCA CACCCTAGAC TTTAAAGAGA CCCAGAATCT AATGATAGCT AACATACCCA 001200
001201 CCCCCTCTAA CAGGCTTTGG CGTATTTCCT GTGAGAAGCA GTTACTGGAG GCCGAATGGA TTCCACTCAT CCACAGCACT 001280
001281 GTGCATGCAA CAGCCAGATT AGGCCCCGGT GGGACTGCGT GGCCCACTGC TTCCTATGGG CTCCAGGGCT GCCCAGCAGG 001360
001361 GATGACCCGG GAGCCGACAA GGGGGAGGCC AGTGGGGGCG TTGGGACGGT TTCCTTGACC CTGTCTCAAC CCAGAGAAAG 001440
001441 AAGCCTGCAG GTGAAAAAGG TCTTCGTGAA AGGAATGAAA AAGGAGAGGG CTTTAGGGGA AGGGGCTGCC TGGTGGCAAA 001520
001521 GCCAGCGCCT TGTGTCCCCA GGCAAACATG ACAGAGTCTC GACGCACAGG AAGAGCCAGT CCGTCTTTAC TGGAGTGAGT 001600
001601 GCGGGAGACA AACAGTTTAC AACAACCTTT AGCATTGTCT TCACCATTTG ATAAAAAGTT CACTATTATA TTTATTGTAT 001680
001681 AATGAAGAAA AACAACACAT TCAGGGAAAA ATTGAGATTA ACTTATTTTT CTTAAAAGGT TCATCTCAAG GATGGCAACA 001760
001761 AAGTCCAGCT TGTGCCGCCA AACGGTTTTA CATGATCAAA CCGTGTACAG CTTCTTGTGT GAACTGTTGA CTACAAACAT 001840
001841 TTACCAAATA CATAAATCTC TTTTAAAAAA GCCATTTTAA ATATAGCAAA GCAGTGTCTT CTTGCACAGC AAAGTGAAGA 001920
001921 AAGTTTCTAC AGAGAAATAG AAGTTTTACA TTTGTAAAAT CTTTTTCACA TTCTAATCAT CTAGCTTAAG ATCCAATGCC 002000
002001 AGGAGTTTTC AGCTTCCTTA TTTACTATGT ATTTCTTGTG CGCATGATGG TTAATACAGA AATTATGTTG ATGCATTACT 002080
002081 AGTTATCCTT CTAGTTAAAG GAAAGGGTAA AACATGTATT GTTCTTGTAG AACAAACCCC TGATTTAGTC TATAACAAAA 002160
002161 TGGACATAAT TGGGCTCAAA AGATGGAGTT TTGATTGGGA CCACCTGTGT ACACACAACA GTGACTTCCA CTCGCGGTGG 002240
002241 AGTGGCCATT AGAGTACTGA GGAAGGACAG CTGTTGGAAA CTGTACTTTA ACCAGTGCAA TTTAAGCTTT TTTTGCTTTT 002320
002321 GTTCTTTAGT AATAAAATAC TTCTGGAGGG ATAAAA
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Predicted Small Protein

Name NONHSAT050878_smProtein_1181:1417
Length 79
Molecular weight 8420.6516
Aromaticity 0.0641025641026
Instability index 41.9025641026
Isoelectric point 10.0676879883
Runs 9
Runs residual 0.0182926829268
Runs probability 0.0317866886495
Amino acid sequence MIANIPTPSNRLWRISCEKQLLEAEWIPLIHSTVHATARLGPGGTAWPTASYGLQGCPAG
MTREPTRGRPVGALGRFP
Secondary structure LLLLLLLLLLLLEEELHHHHHHHHLLLLLEELLEEEEEELLLLLLLLLLLLLLLLLLLLL
LLLLLLLLLLLLLLLLLL
PRMN -
PiMo -