NONHSAT052768

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT052768

Source

NONCODE4.0

Same with

,

Classification

sense

Length

2733 nt

Genomic location

chr17+:28781039..28783881

Exon number

2

Exons

28781039..28783369,28783480..28783881

Genome context

Sequence
000001 gcctccaggc ctttgatggg aggggctgcc gagaaggtct ctgacatggc ctggagacat tttccccatg gtcttgggga 000080
000081 ttaacattag gctcctggct acttatgcaa atttctgcag ctgggttgaa tttctcccca gaaaatgggt ttttcttttc 000160
000161 tattgcatag tcaggctgca aattttccaa acttttatgc tttgcttccc ttataaaact gaatgccttt aacagcaccc 000240
000241 atgtcacctc ttgaatgctt tgctgcttag aaatttcttc cgccagatac cctaaatcat ctctctcaga ttcaaagttc 000320
000321 caaaaatctc tagggcaggg gcaaaatgct gccagtctct ttgctaaaac ataacaagaa tcatctttgc tccagttccc 000400
000401 aacaagttca ttatctccgt ctgagaccac ctcagcctgg accttattgg tcatatcact atcagcattt ttgtcaaagc 000480
000481 cattcaacaa gtctctagga agttctatgc tttcccacat tttcccatct tcttctgagc cctacaaact attccaacct 000560
000561 ctgcctgtta cccagctcca aagctgcttc cacatttttg ggtatctttt cagcaacacc tggctctatt ggtaccaatt 000640
000641 tactgtatta gtctgttttc aaactgctaa taaagacata ctcgagactg ggaagaaaag gagatttaat tggacttaca 000720
000721 gtcccacatg gctggggagg tttcacaatc atagcggagg atgaaaggca cttcttacat ggcagtggca agagagaatg 000800
000801 agaaggaagt gaaagtggaa tcccctggta aacccatcag atcttgtgag acttattcac tatcacaaga atagcatggc 000880
000881 aaagacccgc ccccatgatt cagtcacctc ccactgggta cctcccacaa cacgtgggaa ttctgggaga tacaattcaa 000960
000961 gttgagattt gggtgggggt acagccaaac catatcaGAT AGGTTATTTA TATATTCCCT AAATTATTTT GTAAAGCTGG 001040
001041 ATATGCTTAT TCTTTTTGTT TTTTTAATAA GATTTTTCTT TAACTTGCTT AGAGTCATTA GTATATACAC ATCCTGAAGT 001120
001121 ACATAATAAA ACTCAGACTA ACCTACCTTC TGTAATGTAT CTTTCTTGCT TGAGATAGTG GCTTATGGAG AAATAAAATA 001200
001201 TTTATCTACA AATTTTTAAG TTAGCATTTT GATTGTATTC AAGTAGAGAA TATTTTCTTA GATACTCATA CTAAGATTTA 001280
001281 AAATTTGATA TTTTATATTT GACTTTTCTC TTTTTTAGAT AATGCCTCCC AACCTGAGAC CAAAGCCATC ATTGAAAATT 001360
001361 TGATTCAAAA ACAGGACTTT AGTCTTTCTG TTGCCTTAGA TGGTGGTTCC ATGCTGGTCA CATATCCTTA TGACAAGCCA 001440
001441 GTACAGACAG GTATGTAGAA TGTCATTTTA TATATATACT GTTTAAGCTT AGGTAGCAAA TCCCAATTAA GTAATGTCCC 001520
001521 TTCCACATTT TTATAAATAG TGAGCATTTG AGCACACTCT ATGAGCAAAT TACCAACCAA AGAAGATTGT ACATACATCA 001600
001601 GCAGTTCAGT TACTTGGAGA GCTCAGATCT AATGGTAGCC CAGCTTTATT GAGTCTAGCT ATCTTGTTCC ATCTGTtcca 001680
001681 tttagtccac aagcatttac tgagcaatta ttatgtctgt aaatattgag aatataaaag tgagtatgac acggtttctg 001760
001761 cctcatgaaa ctcCTATGTA ACCAAATACT AACAGTACAG ATTTGTCCTT CCCTGTTTTA AACTTTGACT AAGTGGTTGC 001840
001841 ACCTTATGGT GAGTTAAATA GTTGGTTGTT TAATCTCTGT GGGGTCGCAG TATATGGAGA TAGTTTGGGT GGTTTTCAGT 001920
001921 GCATCTTACA AAGAATATTG TTATTAGGCT ACAGTTGTCC CAAAATGCAG TAAGACATAC CAAAACAAGT TTGTATTTTA 002000
002001 GTGTGATAGT CTGTTGTGAA AACTCACCAT TAGAACCTTT TCATGTAAAG AGGATGTTTG TCTTCTATTA TCTTGGGCTA 002080
002081 AATAAAACCT TTTAGGGTTA ATTATAGTAA CAGTATACTT AAGTGGAGTG CAAAATTTAT TAGGAGAAAA AGATGACTTG 002160
002161 TATCCATGAA GGTTAACTTG GGGGAAAAAA ATCATTTGGA TTTCTCCACT GACTTCTAAA TTTTTCTTTC TATAGTGGAA 002240
002241 AATAAAGAGA CTCTGAAGCA TTTGGCATCT CTTTATGCAA ATAATCATCC ATCCATGCAC ATGGGTCAGC CCAGTTGCCC 002320
002321 AAATAAATCA GATGAGAATA TTCCAGGAGG AGTAATGCGT GGAGCAGAAT GGCATAGTCA CCTGGGCAGC ATGAAGGTAT 002400
002401 GCTTTCTAGA ACATGGTTAG AATGGAGTTA Tggccaggca caatgccgta tgtgtaaacc cagtgctttg ggaggccaag 002480
002481 gcaggtggat tttctgagtt tgggagttca agaccagcct ggccaacatg gtgaaacccc atttctacta aaaatataaa 002560
002561 aattagctgg gtgtggtggc agacgcccgt aatcccagct acttgggagg ctgagtcagg agaatcgctt gaacctggga 002640
002641 ggcggaggtt gcagtgagtc gagccgagat cgcactactg cactccagcc tgggcaacag agcaagattc catctcaaaa 002720
002721 aaaaaaaaaa aaa
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Predicted Small Protein

Name NONHSAT052768_smProtein_506:763
Length 86
Molecular weight 10142.4825
Aromaticity 0.211764705882
Instability index 65.8788235294
Isoelectric point 9.34283447266
Runs 13
Runs residual 0.0163992869875
Runs probability 0.0595097359805
Amino acid sequence MLSHIFPSSSEPYKLFQPLPVTQLQSCFHIFGYLFSNTWLYWYQFTVLVCFQTANKDILE
TGKKRRFNWTYSPTWLGRFHNHSGG
Secondary structure LEEEEELLLLLLLLLLLLLLLLHHHHHHHHHHHHHLLLEEEEEEEEEEEEEEELLHHHHH
LLLLLEEEEEELLLLLEEEELLLLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLL
LLLLLLLLLLLLLLLLLLLLLLLLL
PiMo ooooooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiii