NONHSAT067510
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT067510 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
2153 nt |
Genomic location |
chr19+:52550187..52553075 |
Exon number |
2 |
Exons |
52550187..52550516,52551253..52553075 |
Genome context |
|
Sequence |
000001 TTAAATTTCT ATTTAGAAAC TTCAGTCACC AGTGAAGGGT GTCCACAGAA ATCATATCTA GGTCCTGGAA TCTTCCTCTT 000080
000081 TCTTCATTTA CTTCTTGTCT CTTCCCAGGG TAGCCAGGAC CTGTGGACTG AAGAGCAAAA CAACTTTCAG GGGTACATTC 000160 000161 ACCTTAACAC GTGGCCCTGA ATATTTGTCT CTTTATTTGG TTCTCTCAAA CCAAGGAAAC ACAAGACCCT CAATGTAGGC 000240 000241 CAAatgcctt tcttcggtga agtgtggaag taacatgaag atgaaagggg aggtcacaaa ggagaatcca catagcatca 000320 000321 tgcctaagca GTTCAAGAGC ATGGGTTGTT GTGGAAAGCC AGAGGATTAG AAAACTCATT GTGGAGGAGG TACTCGGACC 000400 000401 TGAAACTTTT AGGAAATGTT AACGTTCATC AAGTCTGTTC CAGCCAAAGT TTGAGCTCAa cacacacaca cacacacaca 000480 000481 cacacacaca cacacacaca cacacacaca cacaAAACCA GCCAGGGCTC TTGTGAAAAG ACTTCGGCTT TCACTTGTCT 000560 000561 CTAGACAAAA GACCACCACC CCGCCAGATA AAATAGGAAA ACCTGGAATA GACACACACG TACACTGGAT TCCCTTAATG 000640 000641 ATTCATCAAT CACTAAGCCT CAGATTAATC CAGAATGTGA AACAGAAGTC ACATTCGTTG ACAAAAGCCA CCCCATCGAT 000720 000721 TCTCAATCAC TGAGCCCCAC TGGGGAGTGA CCCGCGAGGA CCACAATCCC TGACCTCAGT ACTCTTGGTC GTTGATCTAT 000800 000801 TCAGGCCTTT AATCACTGAC CACCAGAGCC TCCATGAGGG ACCCCAAAGA TATCCTATCA CAGACACCCA CCAGGGACTC 000880 000881 CTACCAGCTC CCCTCCAAAA GGAAACACCC GCCCCCGCCT CCCCCAACCC CCGCGCTACC TCCACCATAT AGCGCCACCA 000960 000961 ACAACGCAGA CGCCCTCAGA AAGCTCCCTC CCACCACGTT TCCACGCCCT GACCCACACA CTGACCTGAC TCTCCTTGGA 001040 001041 ATCGCCGCGA CCTCTTAAAA GCTGAACTTA CTTCCCTAAA CTTCTTCCAC TTCTGGGCCC CTCGCCCAAC TCCCTCCCCC 001120 001121 TCTAAACCTC CAGAGACGGT CAGCCGCGTT TCCATGGAGA GCGGAATGCG GCCTTCCGGC TTTTCCTCAG GAGGAGACGC 001200 001201 GTCCGCGCCG GCGTCGCCTC GCCGCTCTGG GGGCGGCCAT CTTTGAGTAC GTGACGTACA GAAGGCACAG CGGCCGGGAG 001280 001281 ACGCGGTGGA CGGAGGCCTC TTAAACTGTC CGATTTCCAG ACACCTCAGC CCTGGCAGAA AATGGAGAGC TTATCAGAGG 001360 001361 CTTGAGTTCA CACAGGCAGA CACGGCGTGG GGGTAAAGTC CTCTGAACAG ACACGGAACA GAAATAAGTT AGTCTTCTCC 001440 001441 TCGCAGGGGA CAGTGAACGG CGCAAACTTC TCAAAGGCCA GAACCCATTA TTACCACAAA GGCGCGGCAT CCCTTCTTAG 001520 001521 CGGTTATGAT GGCTGTGACG TCTCAGCTCA ATGGAAAATT AAAGTCACCT CTGGGCACCT CAGTCACTAT TGTAAATGCG 001600 001601 AAGCGTTTTA GAAGCCGTAT AAAAACTGAA GCAAGAGAGA CTAGAACAAA AAATAAGCGA GCGGTGCGTT GCAGGTAACG 001680 001681 GAGCCAGAGC CCTTAGGGGA GAGCATCATG GGGGCGGCCA TCTTAGGGGA CGTTCGGTGT CCGTACGGCA GAACATATTC 001760 001761 TCTCTGAGAA GCTTGCGGTG GAACTGGCCC ATGGAAATGT CTTTAGAAGA GAAGAACCAC CTggctctgt tcttgactct 001840 001841 ggaaaagaat ccttttctag aattatttag gttgttgcca gattaatttc ctttagagag tttccttgcc cccacgactt 001920 001921 cctatcttta aagccaacaa tagtatgtga aatccctttc atatttgaaa ccactgacta ttgctgctgc atctctccgg 002000 002001 tttctcctat tcttaagtgc ttgggcaatc cagaataatc tcccaatgct aaagtcagct gattaataaa cttaattaca 002080 002081 atgcagagtc ctttttgcca tgtaacataa cCATGGGAAT TACTCTGGGG TTGTAGATCT GGCTATGATA TGA |
Predicted Small Protein
Name | NONHSAT067510_smProtein_833:1057 |
Length | 75 |
Molecular weight | 8074.1057 |
Aromaticity | 0.0405405405405 |
Instability index | 55.4513513514 |
Isoelectric point | 9.69171142578 |
Runs | 7 |
Runs residual | 0.0480553724456 |
Runs probability | 0.0429000429002 |
Amino acid sequence | MRDPKDILSQTPTRDSYQLPSKRKHPPPPPPTPALPPPYSATNNADALRKLPPTTFPRPD PHTDLTLLGIAATS |
Secondary structure | LLLHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHLLLLLLLLLL LLLLLLEEEEELLL |
PRMN | - |
PiMo | - |