NONHSAT068203
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT068203 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
2141 nt |
Genomic location |
chr19+:57417514..57419654 |
Exon number |
1 |
Exons |
57417514..57419654 |
Genome context |
|
Sequence |
000001 GTGAGAGAAG GATCTGGGCT ACAGCTGGCG TACCCTGATG GCGGCTGGGC CTGTGGCTGT GGCTGAATTA TCTCAGAAGA 000080
000081 AATGAATTAC CTCAGAAATG ATAAAGGAGG ATTAGGACCA TCCACACCCT TGGTGGAATG CCTGAGCTCT GGTGGAAGCA 000160 000161 ATATCTGTTC AGACGGATCT CAGCTCAGTA CGCAAGAAAA ACCCACCACA ATGGCTTCAA TGAGTAAGGG ATTTATTTTT 000240 000241 CTTCTGTAAC TGGGGGTGGA CTGTCATAGC TCACTGACTT CATCAGGGAT TCAGGCTCCT TTTTTCTTAC TCTCTCCGCC 000320 000321 TTTCATAGCA CACGGACTTT CATAACACAC AGACATCTTC CTCATGGCTG CAAAACGGCT GTGGCGCTTC CAGGCATCAC 000400 000401 ATCCGTGTTC CAGGCAGAAA GAAAGGGGAA AGACCAAAAC CCTTCTCCTT ACAAAGCTTT GCTTTTTATT TGAGAATGGA 000480 000481 TGGCAAAAGG ATTTTCACCC ACGTCCCACT GGCCAGAACT GTCTCACTTG CCCCATTTAT ACAGCTGCAA GGGTTTCTGG 000560 000561 GAGAAAATAT TTTTGACTGA GCACATTGCT GCTGTGGACA GAATCAGAGG TTGTTAACAT TAAACAAGAG AGAGAGTGGA 000640 000641 ATGCAGAGCA GGAAGGCAAG CAGAATGTCT GGCACAGTCA GTAGCAAAGT GAGGAGAGAG CTTCGAGAAG AGGGGTCTAA 000720 000721 GCAGGATCCT GGAAGTGAGG TGGGTCTCCA GAGGGAGTGC TGAAGGTATT TTCATTTCAG GAGGCAAGAT CTGGAGGAGC 000800 000801 GTTGGGAAGG GAATCGAAAT AGCTCTCAAA TGCCCTCACT GCCACCCACT AATGGAGACA TGATCGTTCC CCTTCTGCAG 000880 000881 ATGGCAGAAT GAAGTCTTAC AGACGCTAAC AGGCCCTTGT CACTGTGGTA ACTTCCTGAA GCATTTATAT ACTTGAATAA 000960 000961 GTAGTCAATA CACGTGATAC AAACCTTTTA TTTAAAGCAC AAAAGAATAC GTATTAGTGA ATTTTCCTTC CCATCGCTGT 001040 001041 GTCCCAGCTC TCTTCCCTGG AGGCAACGAC GGCTAACAGT TACAGTTGAT CTTCATTATT TGCAGATTCT GTGTTTGCAA 001120 001121 ATGTACCTAC TCACTAAAAT GCATTTGTAG CCCCTGAATC CATATGCACA ATGTTTTCAT AGTCATTTGT GGATGTGCGT 001200 001201 AGAGCCGTGA AACATTCGAG ACCCTCACTG TACAGGTTCC CAGAGAAGGT GGACCGAGGT CTCCGCCTTC TTGTCTCAGT 001280 001281 TCTCATATTG TAAACAACTG TCCTTTTGGC CGTCTATTTA GTGCCACATT TTTTGCACTT TGGTTGGTGA TTTGGCTGTT 001360 001361 AAAAATGGCT CCTAAGCATC GTGCTGATGT GCCGTCTGGT GTCCGTAAGC GCAGAAGCTA TGATGCGTCT TATGGAAAAA 001440 001441 ATCTGTGTTA GATGAGCTTT CTTCAGGCAC GAGCTATAGT GCTATTGGCC ATGAGTTCAA TGCTAATGAA TCAGCAATAT 001520 001521 ATATTAAATA AGGTGTCTGT AACCAAAAAC TCACATAAAG CAAGGTTTTG TGTGAATCGG TTGATGAAAA TGCAGGAACC 001600 001601 TGAGTGTGTT AACCTTTTTT TTTTTTTTCA TTTTCTGTAT TTGTGATGCT TTGACATTTG AGAATGTGCT GATCCCAGAG 001680 001681 AGCCTGCCTC TTCCAGGGCC AGCCAGTTCC TAGAGATTGA AACAGTAACC TAGGAGTGCA CCTCTCTCAT GCAAACCGGT 001760 001761 CAGTCTGGAA ACCTTCCTTC AAACCACATC CTTCAACTAC CACCTTTGTG GGGCTCCCAC AAGTGACCCA CATCCCCCAT 001840 001841 GCCCTAGTAT TGCCTCAAGT CCAGGTACCA GACAACTAGT GGCAGCTACA CCCTGGAGCC TGCTGAAATT ATTCCAATTT 001920 001921 GCCAATCTGA AGGCTGCCTA CCCCCAACTG GTTCCTTCCC AAGGAGACCA TAATAAAGTC CTGTGCCTTC CTTTCTCCTC 002000 002001 ACTCCTCTGT CTCCCGGCCA ACCCTGGTGC TTCCCCATGT TCCCCCATGT GGCATGCTGT GCCTCTGGGT TCCAGGGATC 002080 002081 TGTGTCTATG AATCTGTTCC TTCACAACAA TCATTTCTGT GCCTGCCTTT TTTTTTTTTT T |
Predicted Small Protein
Name | NONHSAT068203_smProtein_1451:1645 |
Length | 65 |
Molecular weight | 7623.1286 |
Aromaticity | 0.140625 |
Instability index | 54.3 |
Isoelectric point | 9.78326416016 |
Runs | 8 |
Runs residual | 0.02359375 |
Runs probability | 0.0382882882884 |
Amino acid sequence | MSFLQARAIVLLAMSSMLMNQQYILNKVSVTKNSHKARFCVNRLMKMQEPECVNLFFFFH FLYL |
Secondary structure | LLHHHHHHHHHHHHHHHHHHHHHHHHHHEELLLLHHHHHHHHHHHHLLLLLHHHHHHHHH HHLL |
PRMN | - |
PiMo | - |