NONHSAT068973
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT068973 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
2163 nt |
Genomic location |
chr2-:8062556..8116945 |
Exon number |
3 |
Exons |
8062556..8064479,8108276..8108410,8116840..8116945 |
Genome context |
|
Sequence |
000001 TGCCAGTTTG AATGAAGGAA GCATGCGTGG CCTGAAGCCT CACCGTGTTC CAGGCGTCCA GTTAAGTGCT CTGCACATAA 000080
000081 TATCACACAT TGCGCTCCAC GATAAGAACA AATTCTCACA TGGGAACCGA GCAAAGTGTA ATGGATGTTC CCAGGAGCTG 000160 000161 CCTATGGGAT TCAAGAAAAC TGTATGAGAG GAGTAACATT TGGGCTGGAA GCGAAAATAC AAGTAAACAT ATGTCAAATG 000240 000241 GGGTCTGGAA AGCAATCCTC CACAGAAAGA AAGCAGAATC TTCTGGGCAT TTCTGAGCAA GTGGACTTCC TTCAGCTGAG 000320 000321 CACAGTCCTC AGGAGAAGCG GACAGGTGCA AAGTGTTGGA AGCCAACACT CACAGCAGTT GGGGGTTGGA GTGCTCTGGC 000400 000401 TTCCAACAGC ATTGAAACCA ACAGCATTGA CTACAGCGAG TTTCTCAATC TTCAGAACAC ATCCCAGCCT CCCTGGGGGC 000480 000481 TGCTAATGCA CAGATTGCCG TTTCCCACTC CAAGAGTTTC TGATTCCAGA GGTCTGGGGT AGGGCTCGAT AATTTGTTCT 000560 000561 TCTAACCACC TAATGCTGTT GGTCCAGTGA CCACACTTTG AGAAATGCTG TACTATGTTT TCTCATATAT TTAAAAATTC 000640 000641 TCACCTCATT TATGGTTTAA AACTTCTAGA ACAATTCTGA ATAGTTTTTG TAATAGTGAG CCTCACTTTC CTGTCTCTGC 000720 000721 CCTTAATGGG AATGTCTCTA ATGATTCACC TTTCATACGG GGACTTGTTG TGGTTTACTG GGCAATTCCT TTTGGCAGGT 000800 000801 TAAAAAAATT CCCTCTGTTT CAAGCTAAAG CCATTTACCA GGAAGAGACG CTAAGTTTTA TCAGAGGGTT TTTCCAGTAA 000880 000881 CTATTGTGAT AATCATGGTT TTTTTTCCTA TTTATTACGA TATCAAACAT GAAACTTATT TGAAGTCCTG GATTAAACGG 000960 000961 TGCTTGTTTT CTATAATGTT TTGTTCCTTA AATGTACTGA CAAATTTAAT TTATTATTTT TTTAGGATTT GAGGTACAAG 001040 001041 TTCATACGTG ATAATGACTT ACTGTTTTGT TTTCATTATT TCCTCCTTCC ATCCTTTCTT GATATCCTTT TTATCTCTTG 001120 001121 GTTTCAAAAT TACACTAGCG TCATAGAATG AGTTGGAAAT TAGCCCATTA TTCTCCATGC CATGGAGTGT TTTGCAAAAC 001200 001201 ATAAGAATGA TCAGTTCCTT ACATATTTGG TAGAATTTAC CTTATAAAAC ACAGTAGGTT TTGTGTCTCT TCTGGAGTCC 001280 001281 AGATACTGCT ATGGACTGAA TGTTTGTACC CTCTAAGATT CATTAGGTTG AAATCCTAGC CTCAAAGTGG TGGTATTAGG 001360 001361 AGGTGGGACT TTTGGGAGGT GATCAGGCCA AGAGGGTGGA GCCCTCATGA ATGGGATTAG TGCCCTTATC AAATAAGGCA 001440 001441 AAAGGAGCTC TTTAACCTCT CCCACCATGT GAGGACAAAG TGAAAAGACA CCATCTATGA ACCAGGAAGC AGGGCCTCAC 001520 001521 CGGATGCCAA ACCTGCCAGC ACCTGGCCCT TGGACTTCCA GCCACCAGAA CTGTGAAGAA GAAATTTCTA TTGCTTATAA 001600 001601 ATACCCAGTT TACGGCATTC TGTTATAGAA GTGCCTAATA GGCTAAGGCA AATACTATAT GGTATTTAGG ATTGCTTCTG 001680 001681 TATATTTTTA AGACTTTTTT ATTTTGGAAT AATAATAATT CACAGAAAAT TTACAGAGAA AGTCTCCACA TGCCCCTCAC 001760 001761 CCCACTTCCC CTAATGTTAA CATAACCGTG GTCCATTTGT CAAAACTAAG AAATGAGGAT TGGTACCATA CTATTGACTG 001840 001841 AATTACAGAC ATTACTTGGA TTTTGTCAAT TGTTTTACTA ATATTCTATT ATTTCTGTGT CAGATTCCAA TCTGGATAAC 001920 001921 ATGTTGCATT TGTTCATCAC GTCTCCTTTG TTTTTCCTGG GCTGTGACAG TTTCTTATTC TTTTCTTGTA TTGCCTGGCT 002000 002001 TTGAATTTTG AGGAATTCTG GTTAAGTATT TTGTAAACTG TCACTAAATT TTGCTTGTCA GATGTTTTCT CCTGGGTTAG 002080 002081 ACTGGGCTTA CAGGTTTTGG GGAAGAACTC TACAAAAGGG AAATGTCTTT CTCATCTCAT CTAATAAATG GATATAGGAT 002160 002161 ATC |
Predicted Small Protein
Name | NONHSAT068973_smProtein_119:295 |
Length | 59 |
Molecular weight | 6665.4515 |
Aromaticity | 0.0862068965517 |
Instability index | 76.6551724138 |
Isoelectric point | 9.42730712891 |
Runs | 11 |
Runs residual | 0.0330617658204 |
Runs probability | 0.0343739461387 |
Amino acid sequence | MGTEQSVMDVPRSCLWDSRKLYERSNIWAGSENTSKHMSNGVWKAILHRKKAESSGHF |
Secondary structure | LLLLLEELLLLHHHLHHHHHHHHHLLEEELLLLLLHHHHHHHHHHHHHHHHHHHLLLL |
PRMN | - |
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