NONHSAT069732
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT069732 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
2307 nt |
Genomic location |
chr2-:27422455..27425917 |
Exon number |
3 |
Exons |
27422455..27423447,27423866..27424942,27425681..27425917 |
Genome context |
|
Sequence |
000001 GTCACATAGG AGTGAGGACT TGGTGGGAGG AAGCTGGGGC GTGATGTAAT ATGCCTTTTG TTTCCAGAGA GACAGAGGTG 000080
000081 GTAGTTTGGC TGGGCAGGGA GCCTTGCTTT ACCCCATTGC TTGTGTTAAC TCACACCTTC TTGTTTCCTC TCCTGTCCTT 000160 000161 TTCCCCCAGC CTTTGGCTAT GGGCTGCTTT GTCTAGGAAT GGCCTATATT TCCTCCCAGA TGGGACCTGT GCTGCAGGCA 000240 000241 GCAATCAGCA TCTTTGGCAT GGTTGGGGGA CCGCTGCTGG GACTCTTCTG CCTTGGAATG TTCTTTCCAT GTGCTAACCC 000320 000321 TCCTGTGAGT GATGCATCTG GATCCACAGT CATGTGTAGC AGGATGGACC TGGGGGTTGG CAGGGCTGTC ACCAGGAGAG 000400 000401 CTGAGGACTG CCGTGAGGGC TGGCAGGACT GGCCTTGTGA CAGGCCTGCA CTGTGTCTCG GCAGGGTGCT GTTGTGGGCC 000480 000481 TGTTGGCTGG GCTCGTCATG GCCTTCTGGA TTGGCATCGG GAGCATCGTG ACCAGCATGG GCTCCAGCAT GCCACCCTCT 000560 000561 CCCTCTAATG GGTCCAGCTT CTCCCTGCCC ACCAATCTAA CCGTTGCCAC TGTGACCACA CTGATGCCCT TGACTACCTT 000640 000641 CTCCAAGTAA GGCAGGGCTT GCTATCTTCT TGTTTTCTCA AAGCCCTCCT TTGAGGGCTT TCACAGGGGT CTTGCTAAGG 000720 000721 GATGGGCCAC CAGAGGCCCC AGGGAAATGT TGGGTATTGG GTCCCAAGAC CCTGGGACCA TGCGGGCAAG TAGAGATTGG 000800 000801 TGCCCAAGGA ATGCCCTGCC AACGAATTGC TAATTGTTCT CACCTCTGCT CTTCCCAGGC CCACAGGGCT GCAGCGGTTC 000880 000881 TATTCCTTGT CTTACTTATG GTACAGTGCT CACAACTCCA CCACAGTGAT TGTGGTGGGC CTGATTGTCA GTCTACTCAC 000960 000961 TGGTAAGGGT GTGGGATTGC GGTGCAGATG AGCACCGAGG GGTTAACAGA GGGCCCTAAG GGACTCTAGG GAGAAAGGCT 001040 001041 CCTGCCCTCT GAGCTCTTGG GTGTCCGTAG CTGTCAGGCT TTTCTGCTGG GATGTAGGAG GTGGGTGGGG GCTGGGGTCT 001120 001121 CTGGGGGCCA AGGGAGGACA TGGGGCCCGC TGCTGTGGAT GGTTCCACCC AGAGACTCAG AAGCACATTT CCATTCAGGG 001200 001201 AGAATGCGAG GCCGGTCCCT GAACCCTGCA ACCATTTACC CAGTGTTGCC AAAGCTCCTG TCCCTCCTTC CGTTGTCCTG 001280 001281 TCAGAAGCGG CTCCACTGCA GGAGCTACGG CCAGGACCAC CTCGACACTG GCCTGTTTCC TGAGAAGCCG AGGAATGGTG 001360 001361 TGCTGGGGGA CAGCAGAGAC AAGGAGGCCA TGGCCCTGGA TGGCACAGCC TATCAGGGGA GCAGCTCCAC CTGCATCCTC 001440 001441 CAGGAGACCT CCCTGTGATG TTGACTCAGG ACCCCGCCTC TGTCCTCACT GTGCCAGGCC ATAGCCAGAG GCCACCCTGT 001520 001521 AGTACAGGGA TGAGTCTTGG TGTGTTCTGC AGGGACAGGC CTGGATGATC TAGCTCATAC CAAAGGACCT TGTTCTGAGA 001600 001601 GGTTCTTGCC TGCAGGAGAA GCTGTCACAT CTCAAGCATG TGAGGCACCG TTTTTCTCGT CGCTTGCCAA TCTGTTTTTT 001680 001681 AAAGGATCAG GCTCGTAGGG AGCAGGATCA TGCCAGAAAT AGGGATGGAA GTGCATCCTC TGGGAAAAAG ATAATGGCTT 001760 001761 CTGATTCAAC ATAGCCATAG TCCTTTGAAG TAAGTGGCTA GAAACAGCAC TCTGGTTATA ATTGCCCCAG GGCCTGATTC 001840 001841 AGGACTGACT CTCCACCATA AAACTGGAAG CTGCTTCCCC TGTAGTCCCC ATTTCAGTAC CAGTTCTGCC AGCCACAGTG 001920 001921 AGCCCCTATT ATTACTTTCA GATTGTCTGT GACACTCAAG CCCCTCTCAT TTTTATCTGT CTACCTCCAT TCTGAAGAGG 002000 002001 GAGGTTTTGG TGTCCCTGGT CCTCTGGGAA TAGAAGATCC ATTTGTCTTT GTGTAGAGCA AGCACGTTTT CCACCTCACT 002080 002081 GTCTCCATCC TCCACCTCTG AGATGGACAC TTAAGAGACG GGGCAAATGT GGATCCAAGA AACCAGGGCC ATGACCGGGT 002160 002161 CCACTGTGGA GCAGCCATCT ATCTACCTGA CTCCTGAGCC AGGCTGCCGT GGTGTCATTT CTGTCATCCG TGCTCTGTTT 002240 002241 CCTTTTGGAG TTTCTTCTCC ACATTATCTT TGTTCCTGGG GAATAAAAAC TACCATTGGA CCTAGAA |
Predicted Small Protein
Name | NONHSAT069732_smProtein_50:316 |
Length | 89 |
Molecular weight | 9834.3617 |
Aromaticity | 0.147727272727 |
Instability index | 46.3261363636 |
Isoelectric point | 6.22357177734 |
Runs | 14 |
Runs residual | 0.0277272727273 |
Runs probability | 0.0687536275772 |
Amino acid sequence | MPFVSRETEVVVWLGREPCFTPLLVLTHTFLFPLLSFSPSLWLWAALSRNGLYFLPDGTC AAGSNQHLWHGWGTAAGTLLPWNVLSMC |
Secondary structure | LLLLLLLEEEEEELLLLLLLLLLEEEHHHHHLLLLLLLHHHHHHHHHHHLLEEELLLLLL LLLLLLLLLLLHHHHHLLLLLHHHHLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLL LLLLLLLLLLLLLLLLLLLLLLLLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTToooooooooooooooo oooooooooooooooooooooooooooo |