NONHSAT070704

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT070704

Source

NONCODE4.0

Same with

,

Classification

sense

Length

3073 nt

Genomic location

chr2-:54092007..54098097

Exon number

3

Exons

54092007..54093360,54093884..54094017,54096513..54098097

Genome context

Sequence
000001 atctattcta agaaaataTA CTGCAggccg ggcacagagg cttacgcctg taatcccagc actttgggag gccaaggcag 000080
000081 gaggattgct tgagcccacg agttggagat cagcctgggc aacaaaaaaa aaagtgagac ctgtgtctac aaaaaataaa 000160
000161 aaaatAAAAA TGGAGTATAT TGAAAATATA TACTGTAATA TGAAAAGTTA CACAAATTAA GAATATAGCA TAGTACTGAG 000240
000241 AATATGAAAG CAATCTAGTC AGTATTTATG AAAATAAACT TTGGTggctg ggtgcggtag ctcatgcctg taatcgcagc 000320
000321 actttaggag gctgacgtgg gcggatcacg aggtcagaag atcaagacca tcctggctaa cacggtgaaa ccccatctct 000400
000401 actaaaaata caaaaaaaaa aaaattagcc atggtgtcag gtgcctgtag tcccagctac ttgggaggat gaggcaggag 000480
000481 aatggcatga acccaagagg caaagcttgc agtgagccga gactgcgcca ctgcactcca gcctgggtga cagagcgaga 000560
000561 ctccatctca aaaaaaaaaa aaaaaaacga aaagaaaaGA AATTGTGGCA TATAAGCTTT ATAGGAAATA GTGCAACCAG 000640
000641 TAAAACATTT TATGATGTAT TTCATATGCT AGTGTAATGA ACGCAGCAAA GAACATGTTA CGTACTCGAC AGACGATGAT 000720
000721 AAAATTATGA GAAACCTTTT GAAGGAATAC AACAGAGCAA AACATCTGTT TTTTAAAATT ATCATTGTGT ATTATGAATA 000800
000801 TTAAACAAAT GTTTGTGATT TATATGTGAA ACAATGTCTT TTTACCGCTT TTTTGTTTTC CCAAAAGTTG AGTTACCATT 000880
000881 CCAATTTGAA ATGGACTGTG TACACGCTTC ATTTAGTACT TTTGTAAACT GTGTTTGTGA TCTGACAGCA GCCTGTGAAA 000960
000961 TTCATAAGAA TCACATAGGA TGTAAGTCTC CATGATGTAT GCCAATTACA GAAATTAGGT TGGTCTGTGT CTTTGTTACT 001040
001041 AACAAAAATA GCTATAGCAG TGGCCTTCAG AGATGTAGAG TCTGGAAAAA CTTGATCTTA ATGTCAGGTT CTGGCACTGC 001120
001121 TTTTACAGTT ATAGCCCTGA TGAGAGCTAT CAGTAGGGAA AATAATTTAT GGAGAAATTT AATTTTGCTA AAAGAGATAA 001200
001201 AAGTTTATGC TCATAACCCT AATgtagttt ttatccatta tgaggccaca aactctttga gaatctgctg aaatctctat 001280
001281 taagaaactg ccaaagagca tacacaaaat ttgcatgcaa tttcagggAA GGTCTTCACC CCAGTTCCCA CACTACCCCC 001360
001361 TATCCTCCAT TATTCCCTCA GACTTAGAAT GTCAGTCCTA ATAGAAATTA TTATATCTAC AGGTTCGAGA AATGGCTGCT 001440
001441 ACTACCTTAA GCGGTCTGCT ACAGTGTAAC TTTCTTACCA TGGACAGTCC TATGCAGATT CATTTTGAGC AACTTTGCAA 001520
001521 AACAAAACTA CCTAAGAAAA GAAAGCGAGA CCCTGGTTCT GTAGGAGATA CCATTCCTTC TGCAGAGTTG GTCAAACGCC 001600
001601 ATGCTGGGGT GCTAGGACTT GGTGCATGTG TTCTTTCTAG TCCTTACGAT GTTCCCACCT GGATGCCCCA GCTCCTCATG 001680
001681 AATCTCAGTG CACATCTAAA TGATCCTCAG CCTATTGAGA TGACTGTAAA AAAAACCTTA TCCAATTTCC GAAGGACTCA 001760
001761 CCATGACAAC TGGCAGGAAC ATAAACAGCA ATTCACTGAT GACCAACTGC TTGTTCTCAC CGATCTTCTT GTGTCACCAT 001840
001841 GCTATTATGC ATAGAAAGGT AAGTCAGCAA AGTTCTGAAT TTACATTGGT TTGGTGACTG AGAACTAGAT ATTTATTGTT 001920
001921 TTTTTTCTTT TTGCTGACAT TCTTAGATGT CAGTGTTTAG ATAAAGTTGG ATGGCGGGGA TTGTTTGTTT TTAAACATGG 002000
002001 CTTTTGCTAC GGCCATTGGA AATGAGAATT TTGCTGTGCC TCCTTGCTTT AGGTTTAAAG CAGAGAAAAT GTGTGACTGC 002080
002081 TTTTGGACCT TTGTAGATGA GTGGTGTCAG CCTGGGAATA GTTAGATAAA GGAAAATACA TCTTATTCTT GGTTGCCTCC 002160
002161 TGGGTGGGGC TGGGACATTT TGTGTGGCCC TGAGGACTCT GGGTTCTAAA AGTTGTGAGA ACTTGATCTG GATTCTTACA 002240
002241 CCCATTCTGT TAAAGAGGGA GTACCCAGAA GCCTTTCTAC TGGAATAGGA AGAATAAAAA TTTCATTTAT TAGGCTTTTA 002320
002321 GAGTTGGATG TCTTGTTACC TAATTGAAAT TTTTTCCTCC CTGATACAGA TGACTAGTCC TCACTTCAGG CTCTTTTCAT 002400
002401 CAAAAATTCC ACACCCTCAG GTACCATCTG TGGTGGCTCT CTGCAAGTTT TAAAACTGCC TCTGCTGAGC TCTCATCATT 002480
002481 TTGGTGGTTT CTGTGTTAGA TCTCGTTAGT CTGCATTCCA CAGCTTCTCA GTTGCCATTT GATTTCCCAA CTTGTCCGGA 002560
002561 AGTGTTTCCA GAATACTGAT CACTTTTTTT TTTTGAGGCA TCTGACAAAG TCACAAAGTC TCAGACTAGA AATAATTACC 002640
002641 CAGTATGATC ATGGCATCCA AGACCAGAGT CTCAGAACTC ATTAAGAAAC AGTTTACTTG GAATGGAGAA TACCCATCTG 002720
002721 TAATACAGGT CCTGTCATTT CATTCATCTC AAATTATTTT GAATTCTTCC CAAATGGCTG CTGGATTTAG GTGGTAATAG 002800
002801 GGGCTGTGGG CCATAAATCT GAAGCCTTGA GAACCTTGGG TCTGGAGAGC CATGAAGAGG GAAGGAAAAG AGGGCAAGTC 002880
002881 CTGAACCTAA CCAATGACCT GATGGATTGC TCGACCAAGA CACAGAAGTG AAGTCTGTGT CTGTGCACTT CCCACAGACT 002960
002961 GGAGTTTTTG GTGCTGAATA GAGCCAGTTG CTAAAAAATT GGGGGTTTGG TGAAGAAATC TGATTGTTGT GTGTATTCAA 003040
003041 TGTGTGATTT TAAAAATAAA CAGCAACAAC AAT
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Predicted Small Protein

Name NONHSAT070704_smProtein_998:1270
Length 91
Molecular weight 10355.1459
Aromaticity 0.0888888888889
Instability index 45.8733333333
Isoelectric point 9.93817138672
Runs 14
Runs residual 0.01569664903
Runs probability 0.0483824160295
Amino acid sequence MPITEIRLVCVFVTNKNSYSSGLQRCRVWKNLILMSGSGTAFTVIALMRAISRENNLWRN
LILLKEIKVYAHNPNVVFIHYEATNSLRIC
Secondary structure LLLEEEEEEEEEEELLLLLLLLLLHHHHHHHHEEELLLLHHHHHHHHHHHHHHHLHHHHH
HHHHHHLLEEELLLLEEEEEEELLLLLLLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLL
LLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
PiMo iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTToooooooooo
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