NONHSAT072396

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT072396

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

3030 nt

Genomic location

chr2-:95421060..95427994

Exon number

5

Exons

95421060..95421374,95421702..95421891,95425026..95426010,95426369..95426572,95426659..95427994

Genome context

Sequence
000001 CCACTCCACC TGATGCCCCC ACAGCCCTCA CAGGGTCTGT CCTCCCAGCA TGCACCTGCC TCTCCCTGCA CCCCAGATGT 000080
000081 CCACCCTGCC TGTTCCCTGA CTTCCTCCAT CCTGTCCAGC AGGATGGGCT GGGAAGTGGG AAAGCCTGTG TGCACATTTC 000160
000161 GTGGCAAGTA GGAGTGACAC ACCATCCCTG GGAGGCACCT GCCAAACCCA ACCCCAGAAG TCTCCCTGAG GTGGTTTTAC 000240
000241 CAAACCCATA ACCCACAACT GTGATTGTGG TTTGGGGGTC AGCACCCGCT AGTGCCAGGG CACTACTGGG AAGCTGGGAC 000320
000321 CTGACCAATG CCCATGGTGT CTGTGGCCTG AGGACAGGGT GTCTTGGGGC CATGAGGACA GGCCACCAAT GGCCATTGGG 000400
000401 TCATAGGGCC TGAGCCCCAG TGTTTTTCCT TCCCTGGCTG CTTCTGGTTC AGTCCCATTC AGGGCCCTAG AGCCCAAGAT 000480
000481 GCAGCATCCA AGGTTCCCTC CAGAAATCCT GGTGGCTCGA CTTATTTTGT CATGTTTCAT CTGATAACAA AAATATCATA 000560
000561 TCAGCTGCAC AGAAAAATGG CTCAAAGTGC TTAATGACTA GAAGAAATCG AGGAGCAGCA AGAAGGTAAT GTGGAGAGGG 000640
000641 GAGGACCTCC ATGACCGGTG TCTGCAGAGC CAGGGGTACA GGCACCCAGT GCAGTGACCT GGCACCACCT GCCTCTCAGA 000720
000721 GGGTGGGTAG CACACTGTCC TTACCTGGGG GACAGCAGGC CTGGCCACCG GCTTTTCTCC CTGTCCCTGC AAGCATCACA 000800
000801 TTGCTGGAAG AGAATTTCAT GCCAGAGCTT GGACCGTCCC TAGCTTGGGA GGTACGGGTT GTCTCTTGGT GACCTAAATG 000880
000881 AAAAAATAGG TCCAGAACAG AGTTCCTGAT GCTGGGCACT CATCCACTCT TTGAATCATG GGAGGGGAGG CCTAGTCCTA 000960
000961 GGTAAACCTA ACCTCTTTGA GGAACCACAG TGCCCAAGGC TGGAAACCTC CAGAATCCTC CGGCCCCCGA TCCTCCCCAG 001040
001041 GGACCCCTGT GGCCTGTCTC ACCAGAGCAT TCTTCCATCT GTAGATGTTT CAGCTGCTGT ACAAGGGAGT CCCATTTCAG 001120
001121 GTGTGGGGCT GGGCATGGTC ACTCCTGCTG GATGTCTGGA AGGTGAAAAC CAAGGACCTA GGGAAATACC AGGTACAGCC 001200
001201 TTTCCACCCT CATCCAGAGC AGGACAAACA GGCCAGGTGG TATCAGGAGC CCAGGTCTCC AGCTGGAGGG AATGTCAACC 001280
001281 CTGCAGTGGG AGCCCATCAC GCATCCTAGG CACAGATGCT AATGTAGGCA CCGCGGAAGC ACTGCTGACT GTTTGGTGGT 001360
001361 TGCTGTTGGG GCAGTGAGCC TTTTGTCCAT TCTGAGATTG GGCTGGTTTC TCCTCTTGGC CCTGCCCTAC AGACCATAAA 001440
001441 GGAAAACAGC AAGAGGTCCG CAGCAAACAT CTACAGATGG CCCTGGACAT CAGCCACATT CTGAGAAACA TGTCATGTTC 001520
001521 TGGGAGGGCT AAGGCATCAA GCTCACCCTG CAGGAATCCC AGTGAATATA TTGCCACCAT CTTGGAGCTC AGTGCCCTCT 001600
001601 TAGTGTAATG GCACCAGCAG ATCTGCCTGT GCACGGACTT CCTGTACTAC CTCACTCCTG AGGGGAGATG CTTCTGCAGG 001680
001681 GCCTATGACC TGGTGCACAA CTTTAGACAC CATCATCCTG GAGCAGCACC TCACCCTCAC TTGCCGGGGT GTTGATGACT 001760
001761 TCCTCAAGGC TAAGGCCACA TTCAAGATTT TGGACTTCAG TGATGCATTT TTGCTGAGCA AGGTGGGCTT CTCCGGGATT 001840
001841 TTAGTTCAGG AGGTAGAATG CAGCTTGAGA TCAAGTGTCT GATCAAATAA CTTGAACTTG ATCTGGAGAG CTCTGGGGAG 001920
001921 CCATAGAAGT TGTTGGATAA AGGAGGGACA GTCGTATATG TTTTAGAGAT GACTGTGGAA GGCTGCCTGG AAGGAGTGAA 002000
002001 CAAGAGCCAG GAGACCAGGG AGGGAGCTTG TGGGGCAGGT CTGGAGATGA CAAGGGAGGG ATCCTGCTTT GATGAAAGGT 002080
002081 CTTCAGGGAA TGTCTCAGGT TACACTCAGG TGTCCTCAGA GCTAGTGTGT TCAGGGGTCT TGCCTCCAGG ATGAAAATGA 002160
002161 GAAGGAGTTG TCAGACAAGA ACATATAAAT GAAGGCTGGC ATCTTCGTGA GTGCCAATCG TTGTCCTGGT GTGGACTACT 002240
002241 GTGGGAATAG GGGTCTCTCC ATCCAGGGAC ATGGTGGATG GACCCTACAT CACTCCATTC TGCCCTTCCT TTCCCTCCCA 002320
002321 TTCTGAGGGC CTCAGTGCAA GGGCGCTGTC CAACCTCTGG TGCTGAAGCA GCCGAGAGAC CCAAGCCTGC CACTCAGGAT 002400
002401 ATGACAGCAC AGCCAGTGGC CTCTACTGGA TCCTGTACAA CCTCAGAAGA CACCTAGACA CTGGGAGTGC TGCCACCACG 002480
002481 TGGTGCAAGA GTTCTGAGGG ACCGCAATTC TGAAGACATT GAATGCTGCT TCCTGCTCCC TCCATGGACC TGCACAGAAT 002560
002561 TGTCCCATGT TTCTGTTTGT TTGGGCACCA CTGAGGAAGG AAGCATGAAG GACGCAGAGG TCAGGCCATT CTATTGCCCT 002640
002641 CCTGCTGCTG GGTCTTTAAT CCTGAGATGG CTTCAGGGGC TGGTCCTtct ccatggcccc ctccacatat ctcagccatt 002720
002721 ttgcaaaccc tggtcagaat gaaacattcc ttgggaactc gggccatgag aagcatcctt cctgaccacc tgactgcgga 002800
002801 aacatcctta tcgcatcctc ccgggcgaag gcccaacagc ctgactgcag gaacatcctt gccatatcct gccgggcagc 002880
002881 aagctctacc gcccagaccc ctccttccca gtcccatgat cgccccagcc tgtgagcggc agttggtgat ggcactaagc 002960
002961 tgatttcctc ctctgcaggg ttttgctagt aataaaggtg ttgctgttga agccaccaac catgtctctc
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Predicted Small Protein

Name NONHSAT072396_smProtein_2666:2962
Length 99
Molecular weight 10358.0235
Aromaticity 0.0204081632653
Instability index 76.3418367347
Isoelectric point 11.2736206055
Runs 9
Runs residual 0.0472057982071
Runs probability 0.0392156862745
Amino acid sequence MASGAGPSPWPPPHISAILQTLVRMKHSLGTRAMRSILPDHLTAETSLSHPPGRRPNSLT
AGTSLPYPAGQQALPPRPLLPSPMIAPACERQLVMALS
Secondary structure LLLLLLLLLLLLHHHHHHHHHHHHHHHHLLHHHHHHHLLLLLLEEELLLLLLLLLLLLLL
LLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHLL
PRMN -
PiMo -