NONHSAT072510
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT072510 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
2951 nt |
Genomic location |
chr2-:96472813..96482510 |
Exon number |
2 |
Exons |
96472813..96473050,96479798..96482510 |
Genome context |
|
Sequence |
000001 CATGAAGAAA AAAAAATTCA AAAGATCTAC GAATTCAGGG TAGGTTTCTT GAAAATATTA ATAAGAAAGT CTGCTAGCAG 000080
000081 ACTAATACAG AGGATGATTG AAATAAACAC AATTAGAAAT GACAAAGGGA ATGTAATTAC CACTGACCCC ACAGAAATAG 000160 000161 AAACAACCAT CAGAAACTAC TGCAAACACT TCTGTGCATA CAAACTAGAA AACTTCAAAG AGATGGATAA ATTCCTGGAC 000240 000241 AAATACACCC TCCCACAACT GAGCCAGGAA GAAATTGATT TGCTGAACAG ACCAATAACA AGCTCCGAAA TTGAATCAGT 000320 000321 AATAAATAAC CTACCAATCA AAAAAAGCCC AGAACATGAT GGATTCCCAG CCATATTCTA CTAGAAGTAC AAAGAAGAGC 000400 000401 TGGTACCATT TTTACAGGAA CTATTTGAAA ATATTGAGGA GGAGGAACTC CTCCCCAACT CATTCTATGA GGCCAACATC 000480 000481 ATCTTGATAC CAAAATCTGG CACACACACA CACACACACA CACACACACA CACACACACA CAAACTTCAG GCCAATACCC 000560 000561 TTGATGAACA TCAATGCAAA AATCCTCAAC AAAATACGGG CAAACCAAAT CCAGCAGCAC ATCAAAAAGT TAATCCATCA 000640 000641 TGATCAAGTA TGCTTCATCC CCAGGATGCA AGGTTGCCTC AACATACACG TCAATTAATC TGATTCATCC CATAAACAAA 000720 000721 ACTAAAGATA AAAACCATGT GATTATCTCA ATATATGCAG AAAAGGCTTT CAATAAAATT CAAGGCCTCT CCATATTAAA 000800 000801 AACTCTAAAA AATCTGGGTA TTGAGGAAAC ATAGCTCAAA GTGATGAGCT GTTTTTGTAC CAGTATCATG CTGTTTTGGT 000880 000881 TACTGTAGCC CTGTAGTATA GTTTGAAGTT GGGTAACATG ATGCCTCCAG CTTTGTTCTT TTTGCTGAGG ATTGCTTGGC 000960 000961 TATTAGGGCT CTTTTTTTTT TTGGTTCCAT ATGAATTTTG AAATAGTTTG CTCTAGTTCT GTGAGGAATG CCATTGGTAA 001040 001041 TTTAATAGGG ATAACTTGCA TCTGTAAATT ACTTTGGGCA GTATAGCCAT TTTAATGATG TTAATTCTTC CTATCCATGA 001120 001121 GCATGAAATG TTTTTCCATT TGTTTGTGTC TTCTCTGATT TCTTTGAGCA GTGTTTTGTA ATTCTCCTAG AGATCTCTTA 001200 001201 GAGATCTTTC ACCTCCCTGG TTAGCTGTAT TCCTAGGTAT TTTATTTTTT CTGTGTGTAG CAATTATGAA TGGGATTATG 001280 001281 TTCTTCATTT GACTCTCTGC TTTACTGCTA GGAATTTTTG CACATTGATT TTGTATGCTA AGACTTTGCT AAAGTTTATC 001360 001361 AGCAGAAGGA GCTTTGGGGC TAAGACTATG GGGTTTTCTA GATATAGAAT CATGTCATCT GTAAACAGAG ACAGTTTGAC 001440 001441 TTCCTGTCTA TTCCTCTCTT CCCTCCTCTA TTTGGATGCC CTTCCAGTTT TGCACATTCA GTGTAATGTT GGCTGTGGGT 001520 001521 TTGCCATGGC TAGCTCTCAT CATTTTGGCA CTTCCGACTA GAAGTGCGAG AGGGGCCAGT GTTGTTGTTA CCTGAAAGGT 001600 001601 AAGTGCAGCC CACAAAAATG CAGTGAAGAA GAAGATATAT GCATATGTTT AAGTTAATAC AATTGAGATA CATTTAGCAG 001680 001681 ACAGAATCAA TAGAGTTGAT GAGTGACTGA CTGGATGTGT GGGGAGTTTA TATCACTCCC AGGTTTTTGA CTTGGGCAAC 001760 001761 CGGGCACTCA AGAAGGAAAA AGAGGATCCA GGGAGAGGAA CTTTTCTGAG GACTGGGGTA GGGCTGAACA GCTGCATTCG 001840 001841 AGACTGGTGG AGGGTGGGCT GGGCATGGGA TGCACAAATG GAAATTCCAC TGGGTCTGCA GCTCACACAT AGGCATGACC 001920 001921 AGCATAGAGA TAGAGAGGCC CCAGTGCTGC TGAGTAACTG TGATTCCCCA GGTGATGGCA TCAGCTGAGA AGGGAAGGAA 002000 002001 GCCCATGTGA GGACACTGAA GAAGGAGTGA GCAGACAATA AGAAGCCCAC AGAAGACAGA GAAGGAACAA CTAGAGGGAG 002080 002081 AAGCCAAGGC AGGCATGTGT GATAACATAT AGGAACTGAG GGAGAGGACA TTTCAAGATG GAGGGGATGC CATACAACAG 002160 002161 GACTATGTGA TGGTTTTTGG CTGTGTCCAT AGGAAGTCAC AACAGGCAAG GGAAAGAAAC CAGAACCCAG TCATGGAGTT 002240 002241 AAGAAGTGAG TCAGAGAGGA GATGGGTAGG GACAGTGAGG TAAGGCCTCT TTCTAAGGAA GTTTGGCTGA AGGATAGACT 002320 002321 AGCTGGACAC ATGCTGGCTG TGTGGGGTAG AGGGAGGAAT GATGGAGGGT AGGAGAGCCT TGAGCCTGCG AGAAGAGTCT 002400 002401 CCTAGAATAG AGAAGCTGAG GTTAAAGTTG TGGAAGACAG TGGGGATAAC TGAGTGACAG ATAATCAGGA GAAGAAAAGG 002480 002481 AGATCCAGAA TCATGACAGA GAGATGACCT TTGCCAAGAG CACAGCCATC TTTCACTGTC ACAGAGAGGT AGGACAAAAC 002560 002561 GATTGGTGTT CAAGAATTGG TTTGTAGCAC AATATTTTAA CTATGTCCTT TAAAAAGTTT CTCCACAGAC ACTACCCAAA 002640 002641 GCAGTCCTTC ACTACAGTGG CAGACAGACC TGAAAATTTT CATCTGAAGC AGCAGAGTGA ACTGCAGAGT CAGAGATAGA 002720 002721 ATCTCACTAT GTTGACCAGG CTGGTCTTGA ACTCTTGGCA CCCAAGCGAT CCTTTTGCCT GGAATCCCAA AGTGTCAGAT 002800 002801 TTACTGAAGA ATATTTCATT GTAATTACTT TTTATACTTT ATAGGTCAAG AGCTCTGTTT TAAAGACAAA ATTTATTGAA 002880 002881 TATACTTTTT CAAACAAAGT TTCATGTTCT AATCATTGTC TGATTTCAGC ATTAAATGAA ACACAGTAAA G |
Predicted Small Protein
Name | NONHSAT072510_smProtein_563:697 |
Length | 45 |
Molecular weight | 5187.1516 |
Aromaticity | 0.0227272727273 |
Instability index | 48.6272727273 |
Isoelectric point | 10.0602416992 |
Runs | 7 |
Runs residual | 0.00401069518717 |
Runs probability | 0.0439473086532 |
Amino acid sequence | MNINAKILNKIRANQIQQHIKKLIHHDQVCFIPRMQGCLNIHVN |
Secondary structure | LLLHHHHHHHHHHHHHHHHHHHHHLLLLEEEEELLLLLLLEELL |
PRMN | - |
PiMo | - |