NONHSAT072522
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT072522 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
2402 nt |
Genomic location |
chr2-:96602559..96604956 |
Exon number |
1 |
Exons |
96602559..96604956 |
Genome context |
|
Sequence |
000001 TTTGTGTGAT TTTTCATGTG TATATTCCTG TCATGTTTGT GTGCTAACCA AAACAAGAGC AAAACAACCC AAAGCCTAAT 000080
000081 GGGTAACAAT TTCAAGGGCA AGCACGAAGA TTTCAGCTGG ATACAAACAC TGCATGATTG ATGGTAGGCT GTGTCATATT 000160 000161 TACCTGTAGT CAATTATGTG TTCCTTTTGC TTTGTAGTGT CTCCTGAGCA ACCGCCTTTA TTCACGGTAA ACATATTTTC 000240 000241 TTTAATTATT AACAAAATGC TCTGTGATAT ATACATGATA TGTTAATCAT TATGTTGTCA AACCCATTCA GCATACGGTG 000320 000321 AAAGACAGTG ATCACATTTC AACTAGATTC TTAGGAAGTA TGGATTCACT AACTTCCAGT GAAGGTAAAT TTGCCACTAC 000400 000401 AAATTTCATT CTAGAAAATG TAGATGAAAA TATTGAAAAT GCTCGTAGTT TTTTGATTCC CACTTTTTAT CCAAATGAGA 000480 000481 TGGAAGGATT TGATGTAAAT ATGCTGATGT TCTTGTTAAT ATCTTTGTTT ATAAAATGAT TTTTAAGGCA TAAGGCGGAC 000560 000561 ATTTTACACT GTGAGCTCTA GCCCAAATGC TTTTCCTTTA AAGTTGTCAT CATTTAAAGA TCCCAGTGTT GAATTCCTTT 000640 000641 GCATGTTAGG GATTTGAGTA GGTGTATTTT GACACTAAAT ATTTTCAGTG CTTCAAAATT GATTGCAATA CTCTCTTCTT 000720 000721 CATCTAGAGA AAAGCTATAC CTGCTGGCAT TACAATTGTT TTAGAACTTC AACGACTTTA TGTCAGTGTT GTTACATTGA 000800 000801 GAATCTTAAT CACATCTTCT GATTACCGGA TTGAGTTTCT GCATGTGTAT GTGTGTGTGT ATCTCTGATT AAAAATGAAT 000880 000881 AAAATGATTA ATCATTCTTT TGTAACTCTT TGGTAGATAC AGTGTTTTAA AACAATGATT CTGAGCTGTT TTGGCCTTAG 000960 000961 AATATTTTCT TCTACTACTA TTTATTGTCT ACAGGTAACC AACAGCCTGA ATTAATGTTT TTTACTTTTA AGTCACTGCA 001040 001041 ATGCACATTA AAAATACTTT ACAAGATACT TGCACTTTCA TAGGTAATAT GTGGAATCTG TTTCCAAGTA TCAAGTCTTC 001120 001121 TGTACGCTTT CACACAATGT ACATAATAGC TGCAACTCGG CTTTTGTAAT CAGTGGAATA TATTTCAGAT CTGTCCAGGT 001200 001201 TGACACAGTT TGGTCATCTT TGTTTTGTTT TATGACTGCA CCACATATTT GATTTGTTTT ATGACTGCAC CACAATTAAT 001280 001281 TAAAGTCTCT TCATGCTGAT ACAAAATGAA CATAAATATG ATGACATACC AACATAGATT TGCTTATGTG GTTGCCTTTA 001360 001361 TTGATTTGTA CTATAAAGAA ATTAAATAGA AGTATTTCAG ATACCCATAG TATAGCTGTA TACACTGCCA TAGCTGTATT 001440 001441 GAGTACATTC ATTACCCCTT AGAGCCATGT TTTTCCATCA TGTTATGACT CTGAAAAACT CCAGTGTATG CTTTTCAGAG 001520 001521 AATGACATTG GAAAGAAGAA ATGGCCAAAG TATCATTTGG TACCTTGGCT TCCTTACATA GATGTTGAAC TCCAGGAATG 001600 001601 ATCAAATCAC AGTTTAGGAC CCCTTTGTTG GGCCCTATAA AGGGTTTCCA GATGTCAAAT GATAGTCTCC AGATGAAGAA 001680 001681 ATGCTCTATA ATGCCTCACC GCTGTGTTTT CCTGTATTTT GTGCTTTTCT GAAAACTTTA AATACACGAA TTTTTGGTAG 001760 001761 AAATGAAAAT CTTTCTATTT TATATATTTG TTTTTGTCCA TGGCACTCTG ATCTCTTTGA ATCTGGTAAG GATCTAGCCT 001840 001841 TGTCTTGTTT ATACCAGCAA GCAGTGTTGT CACTTAATGC TCTCATTTTT CACGTAAATG ACTGACATTT TCCCAAGTCT 001920 001921 TCACAAGTGA TTTCTGAAGA TGTTGCTGCA TTGAGCAGAG ACTATGTCAT TGTAATTGCA GAAGTTTTAA AATTAAACAT 002000 002001 GTTTAATAAA ATTTTAGAGT CTGTTTATCT GGAACACATA ACACATAATG GTGTAATGTG TATTTAACCA TAAATTAGCT 002080 002081 TCACAAAAAG TTTGTGTACA TAAAAGTGTT TATATCCAAA GAAATTCTTA TTTACTGCTC AGTAATCTCT TGTGTAGAGG 002160 002161 AAAATATGTA ACATAGTTTG CTGAGTCTTT GATAATAACC CTCAGTGTGA AATAAAGCCG TAAAGATAAA ATGAGAGTTG 002240 002241 ATACTCGATG AAACTGATGT GAGTGAATAG AAACTATGAA ACTGTGTCTA TGGGAGAGAG GAGGACATGG GGCTGCTGTT 002320 002321 GTGAAGAAGG AATTTGTACA AGTTAGTCCA TTTTCTGTAA CTTTTATATT CTAATAAAGG AAAACCATAT CTTCATATTT 002400 002401 AT |
Predicted Small Protein
Name | NONHSAT072522_smProtein_359:538 |
Length | 60 |
Molecular weight | 6799.7253 |
Aromaticity | 0.135593220339 |
Instability index | 46.0222033898 |
Isoelectric point | 4.05621337891 |
Runs | 7 |
Runs residual | 0.0258124708443 |
Runs probability | 0.0203522850582 |
Amino acid sequence | MDSLTSSEGKFATTNFILENVDENIENARSFLIPTFYPNEMEGFDVNMLMFLLISLFIK |
Secondary structure | LLLLLLLLLLEELHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLHHHHHHHHHHHHLL |
PRMN | - |
PiMo | - |