NONHSAT077525
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT077525 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
2232 nt |
Genomic location |
chr2+:234990903..234993134 |
Exon number |
1 |
Exons |
234990903..234993134 |
Genome context |
|
Sequence |
000001 TTTCTGTTAA ACAAAGAGAA TGGTGGCTTT TTTGAGTGGA GCACACCTGT CCCCACTTGT GGAGTTGCAG AATGTGGGCA 000080
000081 CTGCCAGGAT TCCCTCTCAG CTCTCACCTC TGTAGAAATC ACGGCACAAT ACAAACAATG GAAAGCTCCT CTATTAAAAT 000160 000161 GTCTGGGTGC CACCGCGAGG CTTGCAGCAG AACAATTTTG GCCTCTCTCC AGAGGCAGGT GTGACCGGAG CCAACCTGTC 000240 000241 TGGAGTGACT TTTTTACTAT GAAACTATCA GCAGCATGGA CGAGTGAAAC AATGTTGCAT TATTTGGAGC CCCTGGGAAT 000320 000321 GTGCACACCC CTTATAAATG GACTGTGTTT ACGCTCCTGT CCCTTCACAG CTGGGATTAA AAATTGCCAG AGTTCAAATA 000400 000401 TTTAATGTTC TTTCCTGTTT TCTATCCCTG GAATGTCTCA GTGTCGTCTG ACTTGTTGCC AACACGTACA CCAGATTTTT 000480 000481 CCTCCCTTGC CCAGGTTATC ACATGTATGA GAAGCTGGAC GGTCAGTTCT TGTCACCTTT GGTGATGTCT TAGCCTGAAA 000560 000561 ATCAGCCGGT GCCCTCCTCA AGTTTGGAGG CAGCCTCCTA GGGCTATTCT GTTCTGTGTT ATTTTTCTTT CCAGGTTGCA 000640 000641 ACAAGATATT TAATTTTGAT CATGAGAATA ATTTTATATT GCATTTCACA ATATGTTATT TCATTTCCTC AGTGATTTTG 000720 000721 GAATGTTAGT GGTCACAAAA GGATGTAGGT AAGAGAAGTG GGAAAGGGGC AAGTTATGAA TTACTCTATA GAATGTTATG 000800 000801 TACTGCAAAG ATGACAAGTT CTATCTTTCT TTCTTGCTCA AGACCCCTGT CAGATCAGAC TGCTTGGCAA GAGGAAGAAT 000880 000881 TTGAGTGAGA AAGTGGCACT TCCAGATATT TAGCAGACCA GGCTGAGTCC TGATGTCTAA ACACAGGCTG CAAGTGGCGT 000960 000961 TGCACAGTCG GGGCGCAGCT ATAGTTGCTA TGGTAGTGGC TGGGGCCACT GGTCCAAGGA ACAGATGAAA TCTCTAACTG 001040 001041 GGGTGAGCTG TAGGGAGCTT CTAGGATCAC ACAGGGACAA AGGAACAATG GCAGTGTCTT AGTCTGCTTG GGGGGCAATC 001120 001121 ACAAGATGCT ATAGACTGGG ATGCTTAAAC AACAGACATT TATGGCTCTC ACAGTCCTAG AGGCCAGGAT ATCCAGCATC 001200 001201 AAGGTGCCAG CAGATTTGGT TCCTGATGAA TGCCCTTTTT CTGACTGGTG GCTGACTTGG TGGCTGACTT CTCACTGTGT 001280 001281 GCTCACAGTG GAGAGAGCAG GAGCTCTGAC CCCTCTTCCT CTTCTTATAA GGATACCCGC CAATCCCATC ACAGAGCCAC 001360 001361 ACCCTCAGGA CTTCATCTAA ACCTAATTGC CCCCCAAAGG CTTCATCTCC AAATACCATC ATATTGCGGA TTAGAGCTTC 001440 001441 AACATATGAA TTTTGAGGGG GAGACAAATA TTCAGTCCAT ATCAGTCATG AAGCATTAGA CACACAGAGC AGTTACACAC 001520 001521 TCCACTGACC ATGGGAGCTC TGAGAGCTAG GGTCACATAC TTGGCGGCTG ACCAACTTCA CCCCTACTTT CCCGATCCAG 001600 001601 TGCTAGCCAA TTCCCCAAAT CAGCCAGGAG TGTGTCTGCT GCATCTCTGG ACTCTCACAG TTGCTACAGT CCCAGTTCAG 001680 001681 CCCCCCAAGA TCACCCTGCA AAAGGACTCC CCAGGGTAAG AACCAGTCTT CCTGGAGGTA CCAACAGGCA GAGAAAGAGA 001760 001761 AACCTCCTCA ACCTTCTCAT TCTTATTTAT TTTCCAACCA CATTTATTTC CATGGAACAG CAATAGGTCA GTGACAGAAG 001840 001841 CCACAGTCTG AGACCCGCAG ATTTCTCAAA TGCACACGTT TGAGTTTGCA TATATACCCC CAAACCACAC TTTTTCTTGT 001920 001921 TCCCTCTTTC AATTCCACCT TCATCTGTGC CCTCCACCTC ACCAGGATAT TCTGTATCAC TCCTGGGTGG GGCCCCAGAG 002000 002001 CTGACCTCTT CCTTGCCCAG CTCAAGTTTC TACATCTTCC TCCTGGTATT TTTGTGCCCT TATAATGTAG GACGTGGTTT 002080 002081 GGGTCCCAGA TGTCCGTGAT GGACCCCCAT GTTTTCCTTC CTTGGTAGTA GATTGCTTTG GCTATTATTC TTTTATGATC 002160 002161 CAAGTTATGC AAAGTATCAA GCATTTATTT TCTTAACTTT CTCGTTAGTA ATAAAGTGAG CTGAATATTT CC |
Predicted Small Protein
Name | NONHSAT077525_smProtein_71:223 |
Length | 51 |
Molecular weight | 5558.4068 |
Aromaticity | 0.04 |
Instability index | 74.088 |
Isoelectric point | 9.21319580078 |
Runs | 7 |
Runs residual | 0.0246783625731 |
Runs probability | 0.0274812627754 |
Amino acid sequence | MWALPGFPLSSHLCRNHGTIQTMESSSIKMSGCHREACSRTILASLQRQV |
Secondary structure | LLLLLLLLLLLLLLLLLLEEEEEEELLEEELLLHHHHHHHHHHHHHHHHL |
PRMN | - |
PiMo | - |