NONHSAT077882

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT077882

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2758 nt

Genomic location

chr2-:242026509..242041747

Exon number

5

Exons

242026509..242028780,242029395..242029459,242033692..242033847,242036658..242036842,242041668..242041747

Genome context

Sequence
000001 GAAGGACGGG GGAGGACCGC TGCTTCCGGC GCCGTAACTG CTGCCATCTT CTCCGCGCTA TGGCTGCGTT CGGCCGTCAG 000080
000081 GGAAATTAAA GAGGGTGCTT TACTGTTGCC CTGAAATTTT CACCATGCGC CAGCAGGACA TTAACGACAC TGTCAGGCTT 000160
000161 CTCAAGGAGA AGTGCCTTTT CACGGTACAG CAAGTCACCA AGATTTTGCA CAGTTGCCCC TCTGTTCTTC GAGAGGACCT 000240
000241 GGGTCAACTG GAATACAAGT TTCAGCAGCC TCGTCTTACA GCGTGACTGC AAAGAAAAAG ACTTTTGTTT TGCAAAAGAA 000320
000321 AAGCAGCTCG GTGACTCCGT CCACATCGCC ACAGTTGAGT CAGATGGCAG TGGCAGTCCT TTGCCAGTGG AAGGAGTTCC 000400
000401 TGCTAAGGGG AGGTGCAGGA GGACTAATTT ATTATTGTGC AACTGCCAGT CCTGCGCATT CCAGCTACGC TAAGCGCCCT 000480
000481 GCCCAGGCAC GTAACAAAAC ATAGACCTGT TTTGAAGTGG CTTGTTACCC AAGGGTGCCT CACTCATCTG CGCCACCAGG 000560
000561 AAGATGAACT GTGAGGGCTC CTATAAGGGG CAGGAAGAGC AAAGCTGTCC TAGGCCAACC AGAGATTCAT CTTTCATGCA 000640
000641 GTGACATGTT GATAAAAAAT GATGGTCAGT ATGAAACTGG TAACAGGTTG TAGATGGCTT TCTATGGTAT ATCCCAGTCT 000720
000721 CTTGCAAACG ATTGTGAAGA ATGCCAGTGT TGTTTAAGAT TCGGCAGTTT GTGTGGGGAG GTGGGGGCAG GATGGGGTTT 000800
000801 GGTTGCCAAA AGAGTTTGGG AAATGCTGGC TTAAACAAAG GCGAGAGGAA GTTCCTTTCA CGTCAGGATT TATGAATGCC 000880
000881 TATGAGCCCA GTGTCAGTGA CGACTTTCTA GCGGCGGTCT TCAACACTTT CTAAATATTA AGCGATCAAG GCCCCTGCCC 000960
000961 CACTTTTAGT TCCAACAGAA TGCCGTTCAC AAGATCTGGG AGGCACTCTC TCAGCCCTCT CCTGGAGCCC CCGGAATTTC 001040
001041 TCAGCAGCCC AGGCCCTCCC GCTGCCCGTG GCCCCTCCTC CCAGGTGCCA GGTGGTCTTC CAGCCTCTCC AAGGGCCCAC 001120
001121 CCCCCTGCCT CTTCCTCCCA CTGCAGCTGA TCTAGGGGTT TCTTGGCCAC ATTTCCCTTG AGAGAGAGTG GGATTTGCCC 001200
001201 TATCCACAGA GAGCCTCATT TCCACCTGAA GGTGTATTTG TCAGTGGCTA GACCAGGTTC ATGTCTGTTT CCCCTTGGGG 001280
001281 ACTTCTGAAC CTTCCTGCCC GGGAGTCTGT AACACAGCAG CACAGGACCG CGCTTCCTTT AGCAGTGCTG AGTAAGCAGG 001360
001361 CAGCGGCACT CTGAGATCCC GGGGCTGGGC AGTCGCCCCC CACTTCCCAG CAGCTCTGTG GTAGTGGGGC GGGAGCAGCA 001440
001441 GGGACGTACC TTAAGATTTC TCCAGTGTCT GACTCTTACT TTGTTTCCTG AAATAATTAG AGAAAAGTCG TTTAATGAAA 001520
001521 AAGAGACTGT GTACCTTGAA TTCTACAGCT ACCTCAGTCC AGGCTGCCTG CTGAGATCCT GTCTTTAGCT CACATACATT 001600
001601 CCACGGTGGG GGACACCATT AGTCCAGACA CCGCTGTGGA GATTAGCATT TTAGTTTGTG TGCGCCCGCC TGGCTTGAGG 001680
001681 CAGTAGTTTA GGAATGACAA GGCTAGAAAC CTGGCTGGCT GTGAGTCAGA GAGAGAGAGG ATGGACGTGG GAGAAAGCAA 001760
001761 GCAAAAGCTA CCCTAGGGAA GAGCCGGTGA CGTGCACAGG CCGAGCAGCA CGGCTGGTGA GCTGCAGGCT GCGGCCTTGC 001840
001841 CCGGACACTT GGTAATGCCA AACAAGTACG TGTGGCTACT CATTGGTCTA TGAGGACGAT GACAGGCTTC GACTCTGTGG 001920
001921 TTTCTAAAGC ATATAATATT CTCACGTACT TCTTTCAGCA AACGCCAAAC AGTAGTAATT CTTGTAACTA CCTTGAACCC 002000
002001 TTTGTGGAAA GAACCTGGGT GTGAGTGAAT AAAAAGTAAA GAGCGACGCG CTATATCGGC CATTAAATAC TCGGGGCTGT 002080
002081 CCGTAACACC CTGTGCTTCC CAATTGTAGC ACCATGTTCT GTGTGAATAT GCATAACCAG AGTGACCCCC CCCAGCACCC 002160
002161 AGCATGCCCG GCTGTGCCCC TCTGGGTATG CTCACATGCA CATATATGGA CATACAGTTT CGTAGCAGAA CGTGGCTGCC 002240
002241 CAGGGGCTGC CTATCTGGGC GAGTAGACCG CCTGGCTCAG CCCACAGGCC TGCAGCATCC CATAGCACCC CGCCCTTGCC 002320
002321 CCATCACCCT GTGGGCTACA TGCAGGACAC GGCATGGGCC TGCTCCCCAG AGGCACCTGT TTGGGGTCTT CTTGAGGCTT 002400
002401 GTGCTTTCAC AGCTCTCTTT GAAGCAGATG TCTTGGTGAA CTCGGTAGAC TCTTTTATAC CTGTTGTCAC AAGAAAGCTT 002480
002481 TGTAAAACCA GACAGTGAAG CAAAATGTTG CCAACTGCTT AACCTAGGCT ATGTGAACCC ACAGTAAACC TGAAGGTGTT 002560
002561 TGAGGGAAAA ACTGCTATTT TCTGAATGAA ACGTGACCTC CTATTGATGT ATTAAAATGT CTAACATAAA GGTCATGTGA 002640
002641 TTTGTAATAA ATTTATTGTG GTACAGTAAT ATGCATAAAA TAAACCCATT TTAATGTGCA TTCTGATGAG CACTGACAAA 002720
002721 GGATATGGTA CTAAAAATAA AATGTGAAAT GTCAAAGA
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Predicted Small Protein

Name NONHSAT077882_smProtein_2339:2497
Length 53
Molecular weight 5729.5837
Aromaticity 0.0961538461538
Instability index 43.1557692308
Isoelectric point 4.59368896484
Runs 9
Runs residual 0.0227075184702
Runs probability 0.0242202987301
Amino acid sequence MQDTAWACSPEAPVWGLLEACAFTALFEADVLVNSVDSFIPVVTRKLCKTRQ
Secondary structure LLLLLLLLLLLLLHHHHHHHHHHHHHHHLLEEELLLLLLEELLHHHHHHLLL
PRMN LLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLL
PiMo oooooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiii