NONHSAT078567

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT078567

Source

NONCODE4.0

Same with

,

Classification

intronic(S)

Length

2990 nt

Genomic location

chr20-:9748764..9751753

Exon number

1

Exons

9748764..9751753

Genome context

Sequence
000001 TATGAAGATT GGTCATTGCT ATGGCTGCTA TAAGAAGTCT TGTTTCAAGG ATGTTTTTTC TTGTTGTGAC ATCTTGCTTT 000080
000081 CTTATATTCA TGTTCTCTTA CGTTTATACC CAGGAGTCTC CTCTGTCCTT TTCTAATCTT TCTTGCTGGA CAGTTTTTTC 000160
000161 CTTAAGACAG CTCTATCTGA GTTGTTTGTC CCTATGGCAG CCATGAACAA TAGAGTAACT ATCTTTGCTG TTTATCTATC 000240
000241 CTTGACAACT TGATGTCCAA CTTGGCACTG AGGATAACTT CTTGAGGGCT CATATTTCCT TTAGGGCCTC AACTCCAACG 000320
000321 ATTCTTCAAC CCCACTGTGA CCTGAAGTCC ATGCATCCTA CCCCCTTTCT GTTGTCTCTC ACTCTCTTCA TGTCCCAATT 000400
000401 TTCTACTGTT TCAGCTCACA TTTTACTCTG CATTACTCTA ATTACTGTCT TGCATTTTCT AGGCACACAT TGCTCCTTTC 000480
000481 CCCTTCCTTT GTAATCACTT GGCAAAAGTC TAACCCAGAT TACATTCAAC TCTTCATGCC CATCTTGCCT ACACTCACCC 000560
000561 AGCTAAACAC AGATGGAGTG AAACACACCA TTGTGCTGGC TCGTTTCACT TTACAGCCAT GACTACAAAC CACGCATGGG 000640
000641 TCCTTAGAGC TGCCGAGTAG TCAGATTATG TTTCTGGAGC CCCTTTACTC TCCTGTTCTT TTAGGTAACC ATTTTATACC 000720
000721 TTATCTTCTC CCTCATTTTC ACCTTCAGCT GATTTTCTTG TTTCTTGTTT CTTTAAGAAA ATAGAAGCCA TCAGAATGAG 000800
000801 ACATCCCCAT GTCCCCATCA TCGCACTGTC AACCGCACAT CTGCACTCAT CTGCGCTCAT GTTCTCTGCC TACATTTCTT 000880
000881 TTTCTTAGAA TGAACTGCCT GTGCTTCCTG CAGAGTCCAA GCCCTCCTCT TAGGAAGTCG ACCGTCCTCT TTCGCCTGCC 000960
000961 CAAGGACATC ACTCTGGCAA CTCTTCCCCC TCTCCTGCAT TATCTGTTGG CCTTTCTGTG TCATACACAT AAGCTCTATT 001040
001041 TTTTCCCCAT CTAAAAAAGA AACTCTTTTG ACTCTAGGCC TCTCCAGCTA CCACCCTACT TTTCTACTGC CCTTTAGAAA 001120
001121 AAACTCCTCA AAAGAATTAT TCTCACATTT CTGCAGGATA ACATCACACA TTCTCCTAGT TCTATATTCT TCTACTAGCT 001200
001201 AATTTCTTTG TACCATATTT AGTTTTTAAA GAGCTCCTTT CTCTATAAAT ATTTCATTTC AATGCCAGAG GTCATATCAG 001280
001281 ATGGAGAATG GCTGGTTGGT GGTTTAACAC TGATTAAAAG AAGAGGAAAA GCAGCCAAAT ATTTAGAGAA AAGGTGAAGC 001360
001361 CATTCCATCC CATCACCTTT GTTGGAGCAT TTCAATTTGC TCTCTACCTT AGATGTGCTC TCTAGCCCAT AGCTGAGCTA 001440
001441 AAGGTATATT AAGTCTGTCT AACCGGGCTT GAAGGGAAGC TGGAAGACCA TTTGTTCTTT TAAATCTCTT TAGTTTGCAA 001520
001521 TTGTCAGATT CAATTTTGAG GGGAAGAGTT CAGAGCATCA TTGAAAGTAA AAAAGATGGG GGAAAGTGAT AGCCACATGA 001600
001601 TAAATTATAT CAAAGTCAAA GTCATCGCCC TATGGCAATT TTTGCAAAGA AGTATTTTTA GCATGGATAG CTAAAGGGTA 001680
001681 GAGCATGTCA CAGAGACACC TGTGTAGTTA TGCAGACTGG CAGGGATGTA GAGGAACTAT TAGAACCCCT GCCTTGTGTA 001760
001761 TCAATGGCAT ATTTTATCCA TGGGCAGAAT TAACAGATAA TATTCGCTAT ACTGATTAGG AGAGAAGACA GCTTCATCTC 001840
001841 CACACAGCTG GAAATATGTC CTGCTTCAAT GTCAATTTGT TTATGCTGTG GGCCAAGTCA TGCCCCCATA TGTCTGTATT 001920
001921 TTCACATCTC TAACAGATAT TAATTGCACT AGATTTGCTG TGCTGTACTT TTGATTAGTC AGAAGTTCGG CCTAGTAAGT 002000
002001 TAGAACTCTG TGTTCTCACT GTGTTAAAGG GATGCTTGTC ATTATATTGT TTTGAAATTG TTTAAAAGAT ACAGTTAGGG 002080
002081 AGGCATAGTC CTTGATCTTT TAAAATCCTT TTAAAGAAAT GAACGGGGCA ATTAGATAGC AAAACTGAAA ACTTATGGGC 002160
002161 TTTTATTTTT TAATTTTTAA TTACTATGGG AACATAATAG TCATATATTC TTTCATTCTT TTTTTCCCTC CCTTCTTGTT 002240
002241 TAAGTTAGGC CAGAGTCCAG TTTTCTTTAT GGTTTTTTTT TTTTCTTTCT TTCCCTTTTT TTTTTTTTTT TTTTTGCGAT 002320
002321 GGAGTCTCGC TCTGTTGCTC TGTTGCCCAG GCTGGAGTGC AGTGGTGTGA ACTTGGTTCA CTGCAACCTC AGCCGCCTGG 002400
002401 ATTCAAGCGA TTCTCTTGCC TCAGCCTTCC CAGTAGCTGG GACTACAGCC GCGCGCCACC ATACCCGTAT AATTTTTGTA 002480
002481 TTTTTAGTAG AGACAGGGTT ATGCCATGTT GGCCAGGCTG GTTGAGAACT CCTCATCTCA AGTGATCCAC CCACCTTGGC 002560
002561 CTCCCAAAGT GCTGGGATTA CAGGTGTGAG CCACCGCGCC TGGCCCCTTT ACTTTTTATT TATTCTTTCT AATTTCAACT 002640
002641 TTTATTATAG ATACAGGGGG TACATATACA GGTTTGTTCC ATGAGTATAT TGCAGCAGGT ATGGGCATAG TACCCAATAG 002720
002721 GTGGTTTTTC AACCCACAGC CTCCTCCCTC CCTCCCCCAT CTATAGTCTA CAGTGTCTAT CGTTCCTATG TTTATGTCCA 002800
002801 TGTGTGCTCG ATGTTTAGCT CCCACTTATG AGAAAGTGTG AGATTTGGTT TTCTAAACCC TGCACGTGTA CCCCTGTGTC 002880
002881 TAAAATAAAA GTTGAAATTA GATTAAAAAA AAGTGAAGAC CCTGGTATAA CTTAAACAGG AAGAAAAAAA GAATTAAAGA 002960
002961 TTATATTACT ATTACGTGCC CATAGTAATC
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Predicted Small Protein

Name NONHSAT078567_smProtein_2318:2524
Length 69
Molecular weight 7220.2151
Aromaticity 0.0441176470588
Instability index 49.9308823529
Isoelectric point 6.88494873047
Runs 15
Runs residual 0.0800874403816
Runs probability 0.0471883648354
Amino acid sequence MESRSVALLPRLECSGVNLVHCNLSRLDSSDSLASAFPVAGTTAARHHTRIIFVFLVETG
LCHVGQAG
Secondary structure LLLLEEEELLLEEELLLEEEEELLLLLLLLLHHHLLLLLLLLLHHHHLLEEEEEEEEELL
EEEELLLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLL
LLLLLLLL
PiMo iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTToo
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