NONHSAT084854

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT084854

Source

NONCODE4.0

Same with

,

Classification

sense

Length

2988 nt

Genomic location

chr22+:31556138..31603005

Exon number

6

Exons

31556138..31556289,31588670..31588688,31591455..31591567,31592922..31592976,31597484..31597601,31600475..31603005

Genome context

Sequence
000001 AAGTCCCTCC GAGAGGGGCG GCTCCGCGTC ATGTGACTGG AGTCCGCGTA GGAGGGGTCG GAGGTCTTAC CCAACAGATT 000080
000081 GACGCGGCGT TAGTATTGGC CGTGTACCCG AAAAACTGAT TGACTGGGCT GGCGTTAACT GTGCGGAGGC AGTTGGCCGT 000160
000161 GTTTACATCA GTGGTTGGAG ACCAGACCTA ACAGACAGGT GTGTCCTGTT TGCAAAGCTG GCATCAGCCG AGACAAGGTC 000240
000241 ATCCCCCTCT ATGGAAGGGG CAGCACTGGG CAACAGGACC CCAGAGAGAA GACCCCTCCT CGTCCTCAAG GACAGAGGCC 000320
000321 AGAGCCGGAG AATAGAGGGG GATTTCAAGG ATTTGGATTT GGAGATGGTG GCTTCCAGAT GTCTTTTGGA ATTGGGGCAT 000400
000401 TTCCCTTTGG GATATTTGCC ACAGCATTTA ATATAAATGA TGGGCGGCCT CCTCCAGCTG TCCCTGGGAC ACCCCAGTAT 000480
000481 GTGGACGAGC AGTTCCTGTC ACGCCTCTTC CTATTTGTGG CCCTGGTGAT CATGTTCTGG CTCCTGATTG CCTAATGCTG 000560
000561 GGCTCCTGCC TACATCCGTG GCAGGGCTCT GGACTGGTGA CGTGCCACCC CAACTCCTGG TGTTTGGCTT CCTGGCTAAT 000640
000641 CTTGACTCCT GGAATCAGTG GGATCAGTAA CACATCAAGG AGTCTTGTTT CTTCATCAGA GCTTTGGAAC TCGAGACCAG 000720
000721 TTGGCGATGA CCCCTGAATA TCGCCACCGC TGTAAACACT CTATAACTTC AGGCCTTGGC ATTGAGTCAT CTCTCATGGG 000800
000801 TGACACCATG AAATCTTGTT TCAGCCAGTT CTGCAGGTCC TGACTCTGCA GAGGGAAGAG GCAGAAAGAG AGAAACTGTC 000880
000881 AGAGTATAAT TTCACCTGAG TTTAATATTA CAGAAACAAA GGGATGCACC AAATGGTATT TCTGGAAATT TTCATGTCTT 000960
000961 TAAATACCCC TTGGTAAGTT GCTTCTGAAG CCAGTGGGGG CTCCTCAGAT AGAGAGGTTC CCCTTTCAAA TCCCAGTGCC 001040
001041 GCTCTGTTCT CTTTCCTTCC CCTCCCACTC CCCCTCTTCT TCCTCTGTAG AGATGCAAGA AATTGCTGTC CCATAAAAAT 001120
001121 CATAATTGCA GTAGCTAAAG CTGGGGTCAC TTCGTGAATT CACCAGAGAC TCAAAGATCT TTTATTGGCT CTGGGCTGTG 001200
001201 CTCAGTGTCT TTGGCCTCAG AGAACAACTT GAATGACTTC CTGGTTTCCT GGCATAAATT ATTCCTGGTG AGACATGTGG 001280
001281 CTTAACTCAC AGGTTTCCCA TCAGCTTTCT CCCTAAAACT ATGTTCATCT GCCTCTCTCT GCCAGAGAAC ATACAGCCGA 001360
001361 GAATACTGCC GAAGCTGAGA CTGACTACTG TGCATTAGGA AAGACCTGGA GTCAGGACTT TGGTGGGATT TGGAGCTCCG 001440
001441 AGGCAGTAAT AACTGAACAA GCAGCCCTGT CCCCTAGGCT GCAGAAGCTT GAATGCATCC TCTCCCAGAA CCTGCCACAG 001520
001521 GAAACTGGGG GCTTTGTCAG GTCAGCCCAA CTGCATGCAA AAGACCACCA TCCTCAGAAG CCAAGTTGTC TTTTATGAAG 001600
001601 AGGCAAGGAA AGGGGAAACC CACATGTGAC CCTGATTTTG GTATGGCTTG ATAGAGTTCC CTGAAAACTC CTTGTATGTG 001680
001681 TGCTAAAACC AGGGAAGCAT GTGACTGCCA AGCAGGCAAC CCCTGATGAT TTGTAAAGCC AGGTGGCAGG GCCTTGGGGA 001760
001761 GCCCCAGCAC AATGATATTG TGTGGTCTTC CCTCCTGTGG AATCGAGGGG AAATTATTCT TCCCAATACC TTGATTTGAT 001840
001841 TTTCAGTTTC ATAAGCTTCT TCCTCTGAAT CTTATTGAGG GACTATGGTA CCAAGCAGGT AGGACTGTTC ACCTGGTGGA 001920
001921 ACAGTTCTTG CTCTGCCTTC TAGGCTTCAT CCCAGAAATC CAGCCTCTTT CTGGAGACCC CAAAGCTGGA GGGAGATGGG 002000
002001 CTTTCCTCTG GGCCTCTCTC CTACTTTGCC ATCCACACTG CTCCTGGCTA ACCCCAGCAA TAACCAACAA ATGGTAGGAA 002080
002081 GCCCCATCTA TTGCTTTTTC TCAATTATGA CTGCATAGTT TATGGAAACA AAGATCTTGA GGAAGATGAG GGAAGCCCTC 002160
002161 CCCTCTTCAC AGTCCCCATC TCTTCTCCTT TGTACCTGTC AACACCAGAG TTCAGTGTTT AAACAGACAA AATATAAAGT 002240
002241 ATTGAGTAGG TGGTTCATAT GCCGAATCCA CTTGGTAGGA AGAAACCACC AGCTTTATAG TGTGCCTGAT AGATTTTAAA 002320
002321 CATTCCTGGG CACCCACTCA AGAGTGCTCT TTTTATCACC TTCTGGAAAT CCGCAAAGTT GCAGGGGCCT CTGGAGTGTC 002400
002401 TCTTCTCTAG AGAGAATTGG TGGGACCCCC CTCAGTGCAG TGGCCCCAAC TAGTGGAGGG AGAGAGGACT TAAGTCAGAT 002480
002481 GGACTCAACA GAAATGGGTT TCCAGAAGAA TAATGAAAAG TTGTGGGTAG GAAAATGAAT CATTTGGACT CTTCAATGAA 002560
002561 ATGGAGTGAG CCCAGGAGAG CTCAGCCAAC AGAGGCACTC TGGGAACCTG TTAGTAAAGC CAGGCTGGCC AAATGCCATT 002640
002641 TGATTTTGAA CCTCGTAGGT CCCCACTCAC CCTCTGCCAG GAGCTAAGTA AGGCAGGAGA GCTGACTTGG GACTCCTGGC 002720
002721 TCGGCCCCAA CAGGGAGCCC CCTTCCCACC ATCCCTCGGC AAGCTCACCA CCTCATCCTT CTGCCAAGGC AGCTTTCCTT 002800
002801 TCTTTTGTGT GTTTTCTGTG TTCTTAGCCT CCACCCTCCT CCTGCCACCC TTGTGGACTA GGACCAGGTC CTGACCCCAG 002880
002881 TCAGAAAATG ATGATATGTA CAGTGGCACA CCTTAACCAG TCACTAATTT TCACTGTTGT GAAAGTGATT TGATTTAGAA 002960
002961 TTAAACAAAT GGTTTTACAT TACTATGA
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Predicted Small Protein

Name NONHSAT084854_smProtein_554:736
Length 61
Molecular weight 6409.183
Aromaticity 0.0666666666667
Instability index 59.6683333333
Isoelectric point 5.95648193359
Runs 12
Runs residual 0.0502659574468
Runs probability 0.0467599952894
Amino acid sequence MLGSCLHPWQGSGLVTCHPNSWCLASWLILTPGISGISNTSRSLVSSSELWNSRPVGDDP
Secondary structure LLLLLLLLLLLLLEEEELLLLHHHHHEEEELLLLEEEELLLEEEEELLEEELLLLLLLLL
PRMN LLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLL
PiMo ooooooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiiiiii