NONHSAT091158
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT091158 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
3722 nt |
Genomic location |
chr3+:111830301..111849851 |
Exon number |
6 |
Exons |
111830301..111830627,111831186..111831306,111831811..111831992,111835489..111835714,111838316..111838409,111847080..111849851 |
Genome context |
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Sequence |
000001 ATTAGCTGCT AGACTCACTC CAGTGGTGGG CAGCTGGGCG AAAGGCCCTG AAAGTTGCTC TTTTCTCAAA ATTCAGCCTC 000080
000081 ATGTAAATTT ACCCTGTGAC CTGCCATGGG GGATTAGGAT GGGCTGGCCA GGCCAGGCTA GGTGGCCTGA TTTTCCCATT 000160 000161 CAGCTTCTGA CCTGGTCTTC TGAAAGTCAG ACTCTGGCCC TCTTCATTAG CCAGCCCAAG TCCTTGCCCC TGGGAATGCA 000240 000241 GGGTGGCTGG CTGTGTAGGT GTTGATCATC ATTAGCGATA ATTAGAGGGC AGAGCTCAGG GAACAAGTTA TGACACCTGC 000320 000321 AAACTAGGGG CCTCTGGAAA TGGGACAGAA AAGTTTCTCA CTTTGGGGAC AAACCAGGGA AGCCTGATTT GTTGCTGATA 000400 000401 CACAGGGTGG TCTCTGTCAA CGTTCAGAAG TTCTGGACCC AGCCAATGTG GTGAAAATGC CACAGTAACG TATGACCTGC 000480 000481 AATTTGGGGT TCCATCAGAT GATGAAAATT TTATGAAGTA TATGATGAGT GAGGAGTTGG TGCTGGGCAT TTTGCTACAG 000560 000561 GATTTCCGTG ATCAGAATAT ACCTGGTTGT GAGAGTCTGG GGCTTGATCC AACATCCCTC TTGCTCTATG AATGAAGTGA 000640 000641 TGGAGGCTGG TCTCTGTCTG AAAGCAGTGC TCTACCAAGT CCTGGAGATG AAGGGAATTC ACTCTGTTTT GCAGAAAAGA 000720 000721 TTCTGTGGAT TAATACAGAA GCACCAGCAA CACCAGAGGG GTGGAGACTC CTTTCTCTCC CGATTCTACA GTCTGGCTCT 000800 000801 AAGCCCAGTA AAACAGCTCC CGAGCACTGC TTCAGCTGGG TCCAGTCTTG ACAAAGGAAG TAGGACTGAA GCCGAATCCT 000880 000881 GAAGCACTGG TGGGATTTGA ATAAGAAGAT TTGCCTTCCT TTACACATGT TCGTGTCTTC TTAGGATGAG GATGAAGATG 000960 000961 ATACTATCAA ATTCCTAATC AGGAAAAAAG CTTTCTGCTG TGTTCCCAGC AAAGGAAAAA TGTTTCCTCA CTCTCAATTC 001040 001041 TGGTAATTTC CTTGGTTCCC TTGTAATGAA GAACACGTAA GTGTTATCCC CAGGAAATCA AGGTACAAGT GTATGGAAAT 001120 001121 TTTACAAATC ATTTTTTTCA GGTATGGGTT AGGCAATATC AGTATTTTAC TATATTCTGA ATTTCTCCAA TTTACAGTAT 001200 001201 Attgcaattg tttgctcact tgtctatatt ctacactaga atgtgagctt cacaaagctg gggaccatat tgatcttgtt 001280 001281 catcgtggta tgtatttcca gtctatgaca caacatctgg cacacagtaa atgggttttc aaaaaatatt tgatgaagat 001360 001361 atgaatACAG AATGAATAGC CAAGGACAGG ACAACCCTGG TGCAGGAGGT CAGCAAATCT ACCACCTTGA CTCCAACGAT 001440 001441 ATAGTTAAAT AACAGGACTT CTCTCTCTTA TAGCACAAAG GCTTAGAATC TCTCTGCAGT CCTGCATCTA CATTAATGTA 001520 001521 TAAGTATCAT TCTGTACATT TTTCTGAATT TGAGGCATAG TCAACTACCT ACATGGTTGA ATGTGAAAGC CCTTTATAAA 001600 001601 GTAGTATCAG TTACAGTATG TAAAAATGTT TGGAAAACAC CATCCAAAAA TATCTCCCCC CGTGAGCTTT CCCATGAAGT 001680 001681 TTCATCAGGA GGAGCAGTGG AGGAGAGGCT GACTGCATCG TGACCTTGGC TGTGATCACC TGCTTGGCTG AGCATTCTGA 001760 001761 CAACCTCTAA GATCTATGCA TCATCAAAGC CTTTGGGGCC CAGAGGCACA GCTGCAGCTC TTCCTCTTCT TTAGGTTACC 001840 001841 TTCAATGTGC TTCAGACCGT TTGCTTACAT TATCTGCTTT GTTGCTAAGG AAACATCGTA AGAAAACTAC TGAATCACAC 001920 001921 CAAGTTAACA AACCAGATTC ACTGAGGAGA AATGAATGAG ATAAGAGGAG GGGGATGATT TTGAGAGATA TTCTCTGAAc 002000 002001 tcctgaggcc acagttttta aatctataaa agaggatgta tatactgctt acacatggag ttataagaat aagctgaggt 002080 002081 taaatatggg caaaaacgat ctgtaagctg GCTGTTTCTC CTACTTGACT TTTCTGCAGT TTATTCTTGC ATTTCAACAT 002160 002161 GGTGGTTTTG GTTTGGGATG GGTTCAGATA GCCTCCAAGA AGCAAGCTAG ACAAATCTCT ATACCCTTAG GCTACGTGTC 002240 002241 AGGAATTTGA GGTATCTGTC TCTTTCACAA TGCCTTCTCT GGCTCTCTGG TCTACCCAAC CTCTCCCTTG TTATAATGCC 002320 002321 GTGGCCCTTC TGATTTATTT CATCATTTGA ACTGTATGCC TTAAAATATG CCCAATGATA CCCCTGAAAA TATGTAATTC 002400 002401 TCAACTTGAA CTGAAAAAAT TCACCCTGTT GAAAGGAATC TCTGGGTCTC CAGCCCCTAA CGCGGGCATT GGTGTTAGAA 002480 002481 AATAACAACA GTGCTTGTTT TTTAATTGCT CCTCTTTCAA AATCTCCTCC TGAAACCATG TGAAAAGCAC AGATAACTTT 002560 002561 ACAGGCCACA GAAAAACTGA CCTTGTCAGC CCTTAGGATT CTTGGATCCT GGAACATTAG TTCCATATTT TAATTATTCC 002640 002641 TTTCCTTAGA GAGAATTCTT TAGGGCTGGA CATTTGAAAG GTCTGTTCAA AAAGAATTAA TGAGGTGGTC TTTGTTTAAC 002720 002721 AACATCAGGG CAATCACAAT GGTGTCTCCA CAAACTTTCT AAAAATTGTC GTAACATGGG GCATGTGGTC ACTTCAGAAA 002800 002801 TAGACACCTA TAGCTTAAAA TAAAATGGCT AGGGTGGAGG TTGAGCACAA AGGTACCTGA GATAGACAAA CAAAATGACA 002880 002881 ACAGGAAATA AGACCTTTTA TTTTATAACA GGGCATAACA GGGACTAGCA GGGTCTTAGT TCCTGTTGCT AGGAGTTACA 002960 002961 TTAGGCTTCT AGCAAAGTAG CATATCTCCT GTCCAAAGTT TTCAAGCATT TTATCTTTTG TCCTGTCTTC ACATTTGTTA 003040 003041 CTATTGCAAC TGCTACTGGT CTAAACAGGG CCCTCTCTCA CTGGGATGTG AAGTCCAGGG CTTGACATAC TTCGTTCTCC 003120 003121 TTGGGCAAGG TCTGGGGGGT GTTTGGTTGA TTTTGCTCTC ACCTGGATGT TCTCTGTTTG GGGCTTTGCA TTCTCACATT 003200 003201 CCAAGGCATC TCTTGAGTGT TCTGCTGCCG CCTGAAACTC AACATATCAG AAACAGGCTA AGTATTTCCT AAACAGGCCT 003280 003281 GTCACTTCTT TTCATAATTT TTCCGACTTT CCTCATTTCT GCTATTTGTG TGTAACTCAG AAATTGACTG GTTGCCCTCA 003360 003361 CACATGTTAA TACTGTTTCC TCAAGCACAT GTCGCAAGCT ACCTTTGATC TGACATGCTC TCCATTGCCA CAGCAACAGC 003440 003441 CCACTGATGT TCTCCAACCT CCATGAACAA GTGATCCTAA ATCATCTGAT CCCAAATATC CAGGGATCCT CGTCATGACC 003520 003521 CTTGAGAGTA TCCGTGTCCA GAGAGAGGCC TGAGGTCCTC AGCTACCATC TCTTTGGTGC AGTTCCAGGA GCTATGCACA 003600 003601 AGTAATGGGG AAAGGTACTG GCTTTGTCTT GTGTAAATCA CACCATCTTT CACAGAAAGC ATGGAGGCCC AGAACAAGGG 003680 003681 ACAGAAGGAG AAGAAAAGGA TTGAATAAAG AAAATAAATT GG |
Predicted Small Protein
Name | NONHSAT091158_smProtein_1112:1363 |
Length | 84 |
Molecular weight | 9900.6531 |
Aromaticity | 0.156626506024 |
Instability index | 46.2638554217 |
Isoelectric point | 7.71539306641 |
Runs | 9 |
Runs residual | 0.031593038822 |
Runs probability | 0.0174390076351 |
Amino acid sequence | MEILQIIFFRYGLGNISILLYSEFLQFTVYCNCLLTCLYSTLECELHKAGDHIDLVHRGM YFQSMTQHLAHSKWVFKKYLMKI |
Secondary structure | LHHHHHHHHHHLLLLHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHLLLHHHHHHHHH HHHHHHHHHHHHHHHHHHHHHHL |
PRMN | - |
PiMo | - |