NONHSAT094668
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT094668 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
2165 nt |
Genomic location |
chr4+:1135160..1137489 |
Exon number |
2 |
Exons |
1135160..1136211,1136377..1137489 |
Genome context |
|
Sequence |
000001 ACTTCATATT GTTAAAATGT CCGTACTACC CAATGCAATC TACCAAATCA ATGCAATCCC TATCAAAATT TCGATGGACA 000080
000081 GAAATAGAAA AACAATTCTA AAATTCATAT GGAACCAAAA AAGACTATGA AGAGCCAAAT TAATCTTGAG AGAGAACAAA 000160 000161 GTTGGAGTCA TCACACTTCC TGATTTCAAA ATCTATCACA AAGTCGTTTT TCCCTTTCCG TTCAGCATCT CTGAAGATGC 000240 000241 CATAGCTTCT GTTGAAACGT TAACAAAATC ATTTTTAAGA TTGAAGTAAC TGTGCCCTGA TATGATTGTG GTTTTCCCTT 000320 000321 TGGTTATTTT TAATTTTTTT CTGTTTGTAT TTGGCTTTCG ATAGTGTGAC AATGATGTAC CTAGGTGTGG TTGTCCTTAT 000400 000401 ATTTATCCTC ATTTGGGGTA CTCTGAGCTC CTTGAATCTC TGGGTTGATG TCTTCCATCA ATTTTCAAAA TTTTTTGGCC 000480 000481 ATTATGTCTT TAAATATTGC CTTTTCTCCA TTCTCTCTCA CCTTTCTCTT TGGGGCTGCA ATTGCATGTA TCTTAGGCCA 000560 000561 TTTGTCTTCC TCACATATCT TACACTCCTT TCTGGTCTTT TCATTCTTTT TTCTATTGAA ATCTCTTCCA GTTCACTAAT 000640 000641 CTAATCTCCT TCACTAATCT TCTTTCCTGG TCTTTTGTTG ACTCTATCGA ATGAGTTCTT CAGACATTGT GTTTTTCAGT 000720 000721 TCCAGAATGT CCACTTGGTT TTTTAAAAAG AGATCCTAAT TATTGAAATT CTCCATCTTT TCATATATCT TGTTCATCAA 000800 000801 TTTCCCTATT TTCTTTAACA TATTAATAGT AATTTTAAAG TCCCGCTCTG AATCATCTGT GTATCTCTTT CTATTGCCTG 000880 000881 TTTAATATTT TGGCTTCTGG TCATTCAATC TTTTTTTTTT TTTTTAAAGC ATGCCTCATA ATTTGGGATT GGATGCTGTA 000960 000961 CACCATAGAG GGTTTTTTTT ATTTTTTTGG TATATTGTAG AGGGTTTGAA TAATGCTATC CTCCTCCAAG GAGGGTTATT 001040 001041 TCCTGCTAGC AAGCCAGGTC CATGTGGCTG ACAAAACCTC TGCTTCATTC TTCAGCGGTT GCTGTTTCCT GCTGGTTGTT 001120 001121 TTTGTTTGCC TGTTTTGAGT CTCTCTCTGC TTTTATGTAA CTTAGGTATC AGCCAGTTAT TTGAGGAAGA TTTTAATTCA 001200 001201 GATTATTAGG CTCCTTATTT TTGTTTCCTT CCTTTTCTGG ATTTCCCTCC TCACTTCCCA GCCACTTTGG CAGTCCTGAA 001280 001281 CTCTGACCTC TCTTTCCTTG GCCCTTTCTC TTGAGATTTA TTACCCTAAT ATACAATTTG AAATTTTCCT GAGTGGAAAA 001360 001361 CACCAGGATG ATTGTGGAGC TCACCTCGTG TCTTTTCCCT CTCCAAAGAT CGTGGCCTCT TAAGTCCTGT CTGTGTTGGT 001440 001441 TGTACTCAAT GCCTTCAAAC AGGTGCTTTA GATGCCCATT GCTCTTGGAA TTCCCAGCCT TCAGAACTGT GAGAAATGTA 001520 001521 TTTCTTTTCT TTATAAATTA CACAGTCTGT GGCATTCTGA TATAGCAACA CAATATGGAT TGTGACAGAT GGCCAACAGG 001600 001601 CATCTCAGAT TTAATTAATC CAGAAAAAAA AATTCCTGAC CCCCCGCCCT CCCACCCTGA CCCAAACCAT GGTCTGCAGT 001680 001681 CTTCTCCATC TCTGTAAATT CTTGTTTATT TGTCTCTTTG TGAACCCCAT TTTCATTCTG TCAGAATGTC TTATAGGTTC 001760 001761 TGCCTTCCAA ATGCATCTGG TATCTGACCA TAGCTCCTCT CGCTGGAGCT CCCTTGATCC AAGCCCCATC CTCTTTCCTG 001840 001841 GATGATGGGA GGAGCTTCCC TGGATATCTC TGCTTCTGCA GCCATGTGGC ATTTAAAGTG TGGATTATAC TAAAAGCCTT 001920 001921 GTCACTCAGA GTCAAATTCA AAGTCTGTCT GTGGCTGTTG ACCAAGGTGC CGTGATGCTG ACCTTCCAGC CCCACCTTCT 002000 002001 ATCCTCCAGC CAGTCCAGCC TCACTGTCTG CTTCCTCAGA CACACTCCAA GTCTCCCCCA TCCCCGTGCA TCACAGCTTC 002080 002081 AGGGTTACTA TCCCAGTGAG TTCTTCTTCG TCCATGCTGG GAGCCTCCTG TCCCCCTCTC TGAGTTGTTT TATGACTTGC 002160 002161 TCATT |
Predicted Small Protein
Name | NONHSAT094668_smProtein_371:643 |
Length | 91 |
Molecular weight | 10505.5491 |
Aromaticity | 0.211111111111 |
Instability index | 50.4711111111 |
Isoelectric point | 7.75347900391 |
Runs | 11 |
Runs residual | 0.0176366843034 |
Runs probability | 0.0460246342599 |
Amino acid sequence | MMYLGVVVLIFILIWGTLSSLNLWVDVFHQFSKFFGHYVFKYCLFSILSHLSLWGCNCMY LRPFVFLTYLTLLSGLFILFSIEISSSSLI |
Secondary structure | LEEELEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHLHHHHHHHHHHHHHHHHHHHLLLLL LLHHHHHHHHHHHHHHEEEEEEEEELLLLL |