NONHSAT095769

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT095769

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2435 nt

Genomic location

chr4+:22999105..23085444

Exon number

7

Exons

22999105..22999236,23001208..23001335,23004707..23004866,23034455..23034491,23042313..23043141,23057462..23058485,23085320..23085444

Genome context

Sequence
000001 agtaagtctc acgagttcgt tataaaaggc agttcccctg cacatgctct cttgcctgct gtcatgcaac gtgtctttgc 000080
000081 tcctccttca ccttccgcca tgattgtgag gcttccccag ccatgtggaa acatattcgc agagcaccca ctaggtgcca 000160
000161 gtaaatgtat gagaagtcct gtggaataag actgaagttg tccttgcctt caagcaactt gcaatTGCCT AAGAACACAG 000240
000241 TTTAAAACCA CAAAACTAAG cttcatgatg aaggtaaaga atcccaagag actgaagttg aagcttttat gtcttttatg 000320
000321 acctagcctt ggaaatcaca tgctgtcatt tctgcgatcg gtcataacca gtcctgattc catgttagag gagactacat 000400
000401 aaggacacag gtaccagaag CTGGATCCAC TGACCTGGAA TGCCTGGACT GAAGCAGgag actaaccagc atgggctaca 000480
000481 tcaaaaaggc tgccatctac tttctgctgg gtaggggcac cagagagact tgtcagaaac tagaaggaag gtagagtgcg 000560
000561 aaatctgagt gttaattccc tggcttcatc AAAGGACACT GGTCTTCACA AGGAAACAGA CTACATGATT CTCCTTTTGG 000640
000641 GCTTCAGTAA AAACCCCCTC CTTTCATCCC TTAGTCTAGG GATGGTAAGA GGTCAGCAGC TAAGAATTCT AGGTTCTTTG 000720
000721 TGGTTTTCCC GTATACATGT CTTTGATGAT AGCCCCTTTG GAAATAAATT CTCCTAGACT TTTTTTTAGG GTGATTGGGT 000800
000801 CATTGTTTTT TCTCCTGGAA CCCTGagtcc tcaaatcaac cctatctgaa atgtgccatt attgctacat tttataatag 000880
000881 aggaagacag atggcttata taatttgatg aagatcacat gttttgtaag aagagctggg attggaactg tagcagtcta 000960
000961 gcttttcaga tcatgctctt aatcaccaCA ATAAGTATCA ATAAGTGTCA ATAATCACTA TAATAAGTGG CATTGTAGCA 001040
001041 TAATGACACT CTACTTAGAG CAATAGCTTA GTTCAAGTCA TCTTTTCCTA TGAAACTTTC CATTTATTTG ACTATTACTG 001120
001121 TTTCATAGAA CCTACCCCTC AAGTTTATTG AGGGTCATAC TTAAATTTTC TATGCTTATG CTCTTTTTTA ATACTCACAG 001200
001201 AAAGAGTGTA CCTATCTAGG GGGCAGAGAC TACAGGTTCA GTTTTTTAAC CCACGGCAAG TAGTCCTATC CTGAGAACAT 001280
001281 GGTACAAAAC TTCTAAGTGC TGCTGTATTT CACCAAGCTC CAGTTGATAT CCAAattgga caactcctgt gtgccaggac 001360
001361 aatgtgctag gcttgcttta AAATGATACA TACAAATAAG ATAAAGCAAA GAGACTTGGC TTTAACATTC AGTAAAACAA 001440
001441 TAATGTGTTT CTTAATAATA AACATTTGCA CGTAAATGCG TCCCATTTTA AGAAAAAGAT ACTTTACCTA TGCTGTTTGT 001520
001521 AAGTTATGTT TCCTTATAAA TTCTATTTTC TTAGCAACTC TCTCTAGTTT CAGAGATGTC TTTCTACTTC CCCTTTGTTT 001600
001601 CTCGTGGTGA ATAGCAATAA ATCAGCTTCA TGCTTATTGC CATGATGATA AATCTGCATG AGTATAAAAG GAATTGAGGA 001680
001681 CATGTACGTT ATAGAATTGT ACTGATATGT ACTTTTTAAA ttatttattt atttatttat tttttgaggc agagtctcac 001760
001761 tctgtcgccc aggctggagt tcagtggcat gattttggct caccgcaacc tctacctccc gggttcaagc aattctcctc 001840
001841 cctcagcctt ccaagtagct gggattacag catccaccac cacgcctagc taatttttgt atttttagaa gagaaagggt 001920
001921 ttcactatgt tggccaggct ggtcttgaat acctgacctc aggtgatcca cccaccttgg cctcccaaag tgctaggatt 002000
002001 acaggcgtga gccactgcgt ccagccCTGA TATGTACTTT ATATGAACAT attcattcat ttaaaaatta ttattgaata 002080
002081 cctactagtt gcttatcatt ttataaagta taggacatag agcctgccgt cagtgaactt ctaatcatgt gggaaatgca 002160
002161 gacaataaac aaatgatgca aaatttatat ttaacttata aatataaaaa aagtatGTTT TAGTGTATAT AATGTGTCAG 002240
002241 tttttgagtg ttaaatttga cagtgaatga aattgacata gcatacttat agacatctga ttgaaccttt atgaaaaatt 002320
002321 tggagtctag tgaaaagaag tgacttgctc aaaatcacac agcacatgaa gaacagagcC TCTATGATGA ATTTCTTGAC 002400
002401 AGGTAGGCTA GAAATCCTAT ATTTTGTTTT TTGAG
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Predicted Small Protein

Name NONHSAT095769_smProtein_1706:1888
Length 61
Molecular weight 6961.6915
Aromaticity 0.216666666667
Instability index 54.9183333333
Isoelectric point 5.82427978516
Runs 10
Runs residual 0.0169326241135
Runs probability 0.0262144497439
Amino acid sequence MYFLNYLFIYLFFEAESHSVAQAGVQWHDFGSPQPLPPGFKQFSSLSLPSSWDYSIHHHA
Secondary structure LHHHHHHHHHHHEEELLLLHHHHLEEEELLLLLLLLLLLLLEEELLLLLLLLLLLLLLLL
PRMN -
PiMo -