NONHSAT097137
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT097137 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
2269 nt |
Genomic location |
chr4-:81116185..81118453 |
Exon number |
1 |
Exons |
81116185..81118453 |
Genome context |
|
Sequence |
000001 TCCCGGCCCG CCTCCTCCTA AAGCTCGGGC CCTCTGGGAC TGCTAGGAGG GGAAAATCGT TTCAGGATTG GAAAGGAAGG 000080
000081 TACCAAAATG ATTGGAGAGG GCCTTTCCCC GTTTCACTAG GCACTTGGAG AAGCTGTGAC AGAGAGCTGG ACACCCAGCG 000160 000161 CGTGCGGACC CCGTGCGTAT TTCCCCGGAG TCCGCGTTCC GTGAAAGGGA GAGGGGTGCG GTTAGCTCCA GGGATTCTCT 000240 000241 AGCCCTGGAG CCACCGCTGA TTTGCGCAGC TAGTTGCCTG GGGGTGATAA ACGGGCGTCG TCTCTCTTCA GGAGCGCCAA 000320 000321 CACTACCAAG CTTCCCCCTG CAAAATTCAG AAAGGATGCG CTTTGGTGAG AACTTGGCTC AGCCTTCCCG TGGCTTGGGA 000400 000401 GATGAGGTTG GAGTGAGAAT GTCACCAGAC CTCGGAAGGG GACATAACGG TACCTCCTAG TCCCAGGACA CGGGTACGTG 000480 000481 GGCGGAGGTG GGGTGTGGGA GGTTGGTGGG AAGAGCGCAG GTTACTGGAC TCAAACAGTT CCTGTTTTTT TTTTGTTTGT 000560 000561 TTTTGTTTTC GTGGGGTTTT TCCCCCCCTC TGCTTGGTGC GTTCTGCGCA GCCCCAGAGG GAGTCTATAA TGGGTACTGT 000640 000641 TGGCACTCTG AGGTCTTGGG GTTGGGGGGC AAGGGTGATT AAAAATAAAA ATGATTACCA AGATGGGCTC CGGAAAGCTT 000720 000721 TTCACATCCA GCGGGTGGTG GAGGAGGGGA TGGAGTTGCC GAGGCCGTCT CGGGAGCCTC GTTTGTGCGC TAAGCCACTT 000800 000801 AGAGGCGCTG ACTTGCCCCT TTAGTGCAGC AGCTGATGCT AATGACTTGA GGTCTTTAAC AGCCTGCAAG TTGACTCCTT 000880 000881 CAACGGGGCT GCAACACCAC GTCGCTGGGG AATCTCGGGC TTCTTTTTCA CAGTTCAATT CTCTACTCCT AAAGGAAGAA 000960 000961 AGGCCTTTGA GTGGTATAGA CAGTTTCTCA ACTCCTTCAG CCCCACACAC ACCACCACTA CTTTGAAGTG GGCAATCTGT 001040 001041 CAGCATTAGG ATAAATCGGA TTGTGTAGCT AGCTAAAGTG GAGGAGGCAG AACCACAACG TAAGGAGACA GCCTCGTTGT 001120 001121 TGTTTTTCCT AGTGTTGAAA TAATGTATTT GGGGAGTTGG CAAAGAGCAG CTTACCATGT TAGTTTGATC CTCTCCCAGC 001200 001201 TTTGAGACCC TTCTCTGGAA CTCAGTGGGG TATTGAGGCT TTGACAGCCT GGTGACTGCA GTCCCAGGAG GCCAGGGGAG 001280 001281 GATTTTGCTG AGGAGAAACA AGTGCAAGGA CTTTCCCATG AAGTTCATGT TCTTCCTTGT TCTCTCTCTC TCTCTCTCTC 001360 001361 TCTCTCTCTC TGTGTGTGTG TGTGTGTGTG TGTGTGTATT TCCTTCTCTT TTCTGGTTAG TACCCCAGGC AAATTCCGAA 001440 001441 TTGCTGCCTA GAATTAAGCT GAAATTCACA GAAGGAAGGG CTGCAAAATC CCCATATATT CAGAGAAAAT GGGGAATCCC 001520 001521 TTAGTTTTCA GGTTAGCTAC TGACTTTTCA AAGAAAGCTT CTTGAAGTGC AGTTTTATGT ACTTTGGCTA TGTGCAATTT 001600 001601 TATCTACTTC GGCTAAGGTT GGCTCCTAAT GACCAAGGCT CAGTGCAATG AGGGCTCTCT CACATGCCTG TATGTAAGAA 001680 001681 TCTGCAGCTA TACTGAGCTA CCAATTGTCT TCTGACTGAT TGCTCCATTG AATACTAGAT TCACTTCTCA GTCTCTCTCT 001760 001761 CTCTCTACAC ACACACAAAC ACACACACAC ACACACACAC AAAGTATGGA CACATGGTCC CCTAATACTT CTTTAAAGAA 001840 001841 TGGGTGGAAG CATTAGAAAT GTGAAAATAA TGTCTCAAAC ATCTGGAAAA TAAACCTCAG GTTTGAAGAA TAGTGGCCAG 001920 001921 AAACTTAAGT TAATTCAGAG TAGAAGAAAG AAGAAAAATA AAGAGCAGAA GAGGCACGGG TGTAAACAAC TTCAAGTTAA 002000 002001 GAAAGAAAAG TAGCCATAAG AGAGTCATGT GGTCCCTTAG AAACTAGACT GATAAATGCA ATATGGTGTG TGAGGAGCAG 002080 002081 TGTTTAAGAA CATAATTTCA TTAATCTGTC TAACAGAACA CTCCTTAATG CTTTCTTTTG CTGTTATTTA GAGAATTGGA 002160 002161 ATTTTATCTT TCAGGAAAAG TCATCTGTCC ATGCAAACCA TTAAAAAATT ATCTTACATA TTGTAAATAT GTAAGCCTCT 002240 002241 ACTCCAGAAT GTGGACATTT AGAAAATAA |
Predicted Small Protein
Name | NONHSAT097137_smProtein_629:823 |
Length | 65 |
Molecular weight | 7272.3644 |
Aromaticity | 0.0625 |
Instability index | 47.003125 |
Isoelectric point | 10.1587524414 |
Runs | 9 |
Runs residual | 0.00796875 |
Runs probability | 0.0263400655559 |
Amino acid sequence | MGTVGTLRSWGWGARVIKNKNDYQDGLRKAFHIQRVVEEGMELPRPSREPRLCAKPLRGA DLPL |
Secondary structure | LLEELLEELLLLLEEEEELLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLL LLLL |
PRMN | - |
PiMo | - |