NONHSAT099004

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT099004

Source

NONCODE4.0

Same with

,

Classification

antisense,sense

Length

3349 nt

Genomic location

chr4-:159587827..159593407

Exon number

2

Exons

159587827..159590916,159593149..159593407

Genome context

Sequence
000001 ATGACGCAAC GGCCAGCCGA GGCTTCCGGG TCATGTACCA AACCAGGGAA AGATAAGGGA CTCCAAGTCC CAGCCGGGGA 000080
000081 GCGGTGAAAC AGCCACAGCG CGGCCAGAGG GGTCCGCGAA TCCCACAGCA CGACGCACGC GCAGTGAAAG GCAGTAGAAG 000160
000161 GCGGGGCGAC GCACACGGCT TCCTGGGAGG TGTAGTTTTC TCTACGAGTG CCCTTCGAGA TCGATTGGAG GCTCGCGCAG 000240
000241 GAGCCGTGAG TTGCCTAAGC CTTTTCATTA ACCAAACTTC TTGAAGCCAC ATCTGCAGTA TCAGCTCAAG TGGAAGAACT 000320
000321 TGCCTTCAAA TGTACAGAAA ATGCACGTTT CCTTAAAACG TGGCGGGACC TCTTGAAAGA AGGCTATGAT TCTTTGAAAC 000400
000401 CTGATGACTG ATTTGGCATA CTTCGTTGTT TAATAATGAC TGCAATAATT CATACTTCTT ATGTCATATT TTGTACATGT 000480
000481 ACCACACATA TAGGATGACC TCTGTCCAGC AGTTCTGTAT ATACTCAGAA TGAAATTTTT CTTGGTTTTC TTGGTTTTTG 000560
000561 TGAAAGCAGA ATACCGATGC TATTTTTGTT GCGGACCAGT ACTTGTTTGT CCTTAAATAC TTTATGCCTC TGAACTTTCA 000640
000641 TAGAATCCTT TATGAAAGTT AACTTCATCA ATAGACGGTT AATATTAATA GAGCCACAGT GCTACCAGTA GCAAACTAGG 000720
000721 TAGACCATTA TTTGTTTTGC AACAAGATGC TAAGCATGGC AGACTTTGAA GTTGCGTTTC ATCTTAAGGA CCAAGGGAGG 000800
000801 TAACTTTAAG GTTGCCAGTG GTGGATCCAG ctccgttagg ctaagttgtc tacagctaat gattgtgtct ttattctata 000880
000881 tccccagcac ctaaaacagg gtcacacaac attcactaaa tgtttgttga ataaaagagt TAACAAACAT AATTGAAAGC 000960
000961 TTTTTTTCTT CCTATATTTA GCATGAAGAC TGTCATTGTT TCTCTAGGAA ATGTATGAAT CTGAACTTTT TTGACTTGAA 001040
001041 GAAAAACATT CTTTTTTTAC AGAGATTTGG ACTTTGATGA TAGGttttaa aaatatatga taaatatttt ttGTACTTGT 001120
001121 TTGATTTTTT TTTTAAAGAC TTTACTTCAG AAAGGGAAAG ACTGTTTAGA AAGAATGCAT ATTTTTTCCC TATTTATTTC 001200
001201 TGTGGTTACT GCTTTTGCAG TTTAACAGTG TTTGTATTTG ATATTTGTAT ATGTTTGATT GCTATCTTTA AAGTGCCTTA 001280
001281 TCAGATTTAT GGCTCTGTGC TATTACTTTT TGAGCTTTGC AAGTTGTGTA CATAATAATT CTAAAGAAGT TACTTTGTTT 001360
001361 GCAATGCATC AAATTTAAAT GATGTGATTT TTTTTGTATT ATTTGATCTT AGTGACAGTG TTCTATTTTG CATCCTGTAT 001440
001441 CTTATGTTGC TTTTGGTGTT TTGTGTTGTG TGTCAACGAT TAAGCCAACT AATTCTCTAC CATATATAAC TTCTGGACAT 001520
001521 TTTTGATACA ACATCTTAAT TCTTTGTAGA TATGGAGATA GGTACAGAAC TATATTCTAA TGCCCCACAA TGGGGCTATG 001600
001601 AGAGGGGACA GATGGATGGG CAAAGAATAG TTTTGTTTAA CATATTAGGT CATAGTTCTT GATTAGTTTT TTTAGTTAAA 001680
001681 GATAAACACA TAGGGTGTGA TTTCTATACC AAAGATATGC TTATTTCAGT ATTAGAAAAA TATTCTTCTT ACATCTCCTG 001760
001761 AAAATTGCaa tttttaaaat gtgtaaaaat aaattattat taaaaGCACA TTTTATTTCC ATTTGTTTGG ATTCATTACC 001840
001841 TTAAAACTTT ATTGACATAT TTCAAAGATA TAGGAAAGGT AAATGATTTC AAGAAAATCC GTGTATTTCT ACCATGCAGA 001920
001921 TGTAATAAAT GTTAGCATTT GGCTATATTT TCTTCAGACA CACATATGCA TGTAATTGCA AATGTTagat acatttgaag 002000
002001 tttgctttgt tacctgtttg atcctgtccc gttcctccct ccccagagtc cccagaggta accactagag ggggcataat 002080
002081 atagcatgtg tttttatatt tttaatacaa atatatTTTT TAAAAGCGCT ACAAAATATT GTTTTATATA tgtggtagcc 002160
002161 agcttccaga tggccccagt gatccctggc ctcctggtgt tcatgcccca gtatagcctt ctcctgcatt ttacagtgct 002240
002241 gacttttgta actaccagga tattgagcaa atgcagtgtg tgatttctga ggcCATATCt tttactcttt tttttttttt 002320
002321 taagagacaa gatctcactc tattgctcag gctggagtgt ggtggcagga tcatagctca ctgtaacctt aaacttggac 002400
002401 tcaaacaatc ctcccatctc gcctcctcct ataaagcact gggattacag gcATTTTTGC TCATTTTTCT ATGTTGTTTT 002480
002481 TTTTACTTGT CAGTTTTTAG ATATTACATA TTTTGAATAC TAATGATCTG TTATGTATGT TCCAATTATC TTTTTTAGTC 002560
002561 TGGTTTGTCT TCATATTTTG GTTATGAAAT CTTGAATTTT TAAAAACGTA ATTTTACCAA TCTTTCATAa tgatttgctt 002640
002641 tttctggttt ttgtatagga aatgtcataa aaatagtcct attcagcctt ccaaaagtta caaaattttt gtttttaaca 002720
002721 tttagatgtt tagtccaact gaaatttgtt ttcttttatg gcatgatttt ggaatcttgt tttaattatt tttacatatt 002800
002801 tatagctgtt cctccaagta tcaatttttc aaGTGCAACA TCTGTCATGC AGTTACTATG TAAGGGCCAG ATTCTGACCT 002880
002881 TTCTGTTCTT TTTATCtgaa ggaaatttga acatgccacc cccaaatatg ccgatttggc atactgatta tttcgagcta 002960
002961 aaggtgcttg actaacagta gttgcagaaa tggctatttt aactgtcctt tcctacctgt agcaagccat acaaacttct 003040
003041 ttgataaaga tgctttcctg ataccaagat gagaagatgg ctctaatcag ctgagacagc accagaggaa tctacaaaca 003120
003121 agaaactatt agtttcttaa catatattta ccttccacag tttctgcctc tggaagccta aaactgcttt ccttcgtctt 003200
003201 gtcacacttc tctgaaatgt attctttgtg gaagatgcta tatagtccag agttgtaagc cactacttgt gtttaccttt 003280
003281 tcattgagtt ttctcctgtg tgatgtacgt tgcatatatt aataaaatta cttgtttttc tcttgttaa
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Predicted Small Protein

Name NONHSAT099004_smProtein_2270:2515
Length 82
Molecular weight 9431.2486
Aromaticity 0.185185185185
Instability index 43.260617284
Isoelectric point 9.16754150391
Runs 12
Runs residual 0.00596844084703
Runs probability 0.0139919331096
Amino acid sequence MQCVISEAISFTLFFFFKRQDLTLLLRLECGGRIIAHCNLKLGLKQSSHLASSYKALGLQ
AFLLIFLCCFFYLSVFRYYIF
Secondary structure LLEEHHHHHHHHHHHHHHHLLHHHHHHHHLLLLEEEEHHHHLLLLHHHHHHHHHHHHHHH
HHHHHHHHHHHHHHHHHHEEL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHH
HHHHHHHHHHHHHHHHHHLLL
PiMo iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTT
TTTTTTTTTTTTTTTTTTooo