NONHSAT101962

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Basic Information

Transcript ID

NONHSAT101962

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2301 nt

Genomic location

chr5-:69428359..69430659

Exon number

1

Exons

69428359..69430659

Genome context

Sequence
000001 AAGCAGTGCA CTGAAAATCA ATTTAAGTAT TTACTGGAGT TGTCTTGAAG GCCCAATGGG AAATGTCAGT AAGGGCACAT 000080
000081 GAGAAAACAC TTTAAGAACC TATTCTTCCA AAGATCTTTC CAGTATCTTA TGACAACACA GTAAATTATA CCCACTCCAA 000160
000161 CTGCAAAAGC TGAAACTACT CTGCTTTCTC ACTTACCTAC ACTTTTGACT TTCCAAATAC ATTTCTCTCT TCGGATATGA 000240
000241 GCTGCAAACT CCTTATATAA AGGCTCCAAC TCTGCAGCCC TAATTATTCT AGTTGGCCCA AGAAAAATCC TAATTGTTTT 000320
000321 ATCTAAGGAG ACGGAATTTT CCAATACTGT AGAGGCATGT GTGTGTGTTT GCTTTAAGGA AGCTGTTTTG GTAATAAAAA 000400
000401 GTCACTGAGG GTCATAAATT CATGTTAACA CATCCAGTGT ACATGAAGTA GGCACCGAGT TAAACTATTT GTCTACTATA 000480
000481 TAGCATGTCA TCTTAAAAGC CTTATTTTTT CCTCAAAATA TTAACTTTAT TTTTCTCCCT GTAAAATCAA GACACAGTTA 000560
000561 AAATGTAGCC TTCCTCATTT TCTGGGAATA CTTTCTAACA AGATATGCTT CTTTCCAATT GGACTTCTAA ATTTCTAGCA 000640
000641 ATTCTAACAG TGCATAAAAG AGGCAACCCC AAAAGTGTAG CAGGTACTGA ATAACAGATT TGCAGCCTTG GGTATCCACA 000720
000721 TTAAAATTTG AAATCTAAGT GAATTACTTC AAGCTGATTT CTTAGGTCAA GGAGAGATTA TGGTCCTTAA ATGCCTGATA 000800
000801 AGGTCACATA CACAATTTCA AGTGCATTAT AGTAAATCCA TGTGACAGCT CCTACAGCTA CTAACCTGCT TCTGCCCTCA 000880
000881 CGGTAGCGTG CACAATCTTC ATCGCATGTC CTGGGTGGTG GTAGGAGCAG TAGAAACCCC CTGGGTCATG TCAGATTTAG 000960
000961 AAAATATAAG CAATGGCTCA TACACGAATT TTAAGTTGTA ACCTACATGT GATAAGTTGC TTTATCTTCC AAATGTAATA 001040
001041 AAAACCAGAA GTTACTTTGA AATAAATTGA AGGATTAGCA GTGGTGACTG AGGAATAAAA ATTATAATTT AAAATTGTCC 001120
001121 TTAAGGCTGG AATTCTTAAC TTATTGACCT TATATCCTAC ATATTATAGG ACTTTGTAAA TTTAGGCTGA TATGGAAATG 001200
001201 TATATTTATA TCAAATTTAA ATTTTTAGAA TGATGGTGCT ACTATATTCT AATTGTTAAT TTGATAATTG TAATTGTAAT 001280
001281 TTGTTAATTT GTTCTAATAA TATTTTCATG ACATTATTCA TTTGCTGCTT GGCTTGATGG CATAACAAGT ATGGGTTATT 001360
001361 TACCCTGAAA AGGAAACAGT ATCACCCTTC CAGAATCTCT ATTTACAGCT ACAGAAGATG CAACACACCT GTTTCTGGAC 001440
001441 CACTTCCAGA TCAGATGTGA TGCATGCTTT AGATCATTTA CTTTGATCTA GGAATTACTG TCTGGCATTT CGTGGTGTAG 001520
001521 GGTAGGTGTC TCCAGCACTG TATAGGTGTC TGGAATTGAG ATAAGAATCA ATTTCAATAC AAAATACATT TTTTGCTTAA 001600
001601 AGCACGCAAG GATTCTATGA ATTCAGGTAA ATTCACAGGG TGGAAAACAG GAACTAATGT TATATATTCC TGTAGTTATC 001680
001681 TTCATAATGA AGCAGAAAGA AAAACAAAAA AGTTACAAAA ATAAATGAAA AGAACTGTAT TTTCTAGAAT TGAAAAATAA 001760
001761 TTCTTTTAGA TGATAGATAA GATGTTTACA TCAACCTGCA AAAAGTCAAT GTTGAAGAGG TCTCATTGTA TCTCACAGAA 001840
001841 TTTTGATTTG CCTACTCACC CACAGGAGAC ATTTCTGGGA CAGTAGCAAC ATAAGGTCCA TCCCAAAACT TTGGCTCATT 001920
001921 ATCATTAATA TCCTGCACTT TGATGATGAA TTCTGATTCA GGCTCCAGGG GCTTTCTGGT TTCTATGTCC ACAGCCTGAG 002000
002001 CACGAAGAGT GTAGAAAGGT TTTTCTTCTC TATCTAGGCT CCTTATTGCA TGAATGTCCC CTGTGGTTTC ATCAATGGTA 002080
002081 AAAACGGTGC CAGCGCCATC TCCTGAGAGG GTGTATTTCG CAGTGCCCTC TCCCTTGTCT AAGTCGGAAT GGAGCTTTAG 002160
002161 GGAAGAGAGG GAGAGAGAGA GGAAGAGAAA GAGAAGGACA AAGAAAGAAC ACCATTAAAA GGATGTTGCC AAATTAAAAA 002240
002241 GTCATAATTT GCAATACAAT TCCTTTAATC AAAAATGTTA AATAAAAATC TTATGGTTCT G
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Predicted Small Protein

Name NONHSAT101962_smProtein_1769:1885
Length 39
Molecular weight 4430.1375
Aromaticity 0.0789473684211
Instability index 56.0447368421
Isoelectric point 8.80426025391
Runs 5
Runs residual 0.0410318559557
Runs probability 0.0124536301007
Amino acid sequence MIDKMFTSTCKKSMLKRSHCISQNFDLPTHPQETFLGQ
Secondary structure LLLHHHHHHHHHHHHLLLEEELLLLLLLLLLLLLLLLL
PRMN -
PiMo -