NONHSAT103374

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT103374

Source

NONCODE4.0

Same with

,

Classification

intronic(S)

Length

2220 nt

Genomic location

chr5-:115887966..115890185

Exon number

1

Exons

115887966..115890185

Genome context

Sequence
000001 TATCTGTGAT GTAGTTTTGT GCAAATATTT TTGCTAGATG GATTTTAAAA ACCTAAAGCT GTTTTAAAGT GGATATTTCA 000080
000081 GGGGCAAACT GGTTTGACTA TGCCCCATAA ATCATTAGAT AGGGCTTGCT CCTACTTGTA CAGGATACAA TTAAGTTTGA 000160
000161 TTTCAACAGT TCAACTGTCT TTTTAGTGCT AGAGACACTT TTTGAGTAAG CATTCTCTCC TCTTTTTTTC CTCTGAATTT 000240
000241 TGCAAGTTGG GAACAAACTC TAACTCCTGG CTTATTATTA ATACTATTGG AATCTGTTCC CATCTATGTG CCGGCAAATA 000320
000321 ATAATTCTTT CTAAGGCAGG ATGTAGTTTT ACAATGCATG GTTTAAAACA CTTTTACTGA TGTTACTGTT TATTACTGTT 000400
000401 TATTACAGTG GAAAGCCCTT TCCTACTATA GGGCTCTCTG TGGCCCTCCT CCCATCATTA CCTATTGAAG TCTCCTTTTT 000480
000481 CCCACTCCTC TCCAGGATTA CAGATTTAAG AACGATCCAT GCTCCACTAC AGATATTTCC AAAACACAAT TGGTATTAAC 000560
000561 CCAGGCTGGA CACATTTTAT CAGTCATTTC TATAATTACT TATTTTAAAA AATGGTATAC ATGGTTGCTG TATCGTATGG 000640
000641 AGTGTGAGAA GCTATCTTAT CATGGTACTA TTCATCCTGG TTGAAAGGAT GTTGGTTTTT CCCCCCCTAA CATCTCACTC 000720
000721 TCAGGATTTC TCTGGACCAG GAATCCACCC CCTCTTTCCC ATTCTCTAGT GTGGCTCCTG CTCCTTTGAA TGAAAGGCTG 000800
000801 CTCTGACTAA AGGAGCTAGA ATATGCCCAG CAACCAAGGC CGGGTACTAT TGAGTCCATT GTTTGCTCCC AGCACTGTGG 000880
000881 AGCCAAATCT CATTTTATAG CACAGTGTGT TCTAGGAATT CCACTTCATC AGTACAACAG ACCTCCTCTA ATGCCTTCCT 000960
000961 ATTTTCCCCA TTTGCTGCTG TCACAGGCAG CGCCACACAG TCCTGTGGCA GGCAATTATA ATTCACTTTT CCCCAAGGCT 001040
001041 CTGCTCTCCC CCTTTTGCAA GGGACCACAA GGCATCAGCT GCCATATTAA ATAGACGCTA ATGACACCAA GTGTGAGCCG 001120
001121 CCAGAGCTGT GGTTGTGATG GTGTGTTTAA GATTTAATCC CTTTGAGGGA CTGAACCTGG AGTTCAGAGG TGGTTTCACT 001200
001201 GAGGTTTATA AGAAATTTGG CTAAGATTAT ACTTAATGGA TTTTCAAGTT CTGAAAGGTA TTTGTGTTTA AAGTGAATAT 001280
001281 GTTAATAAAA CTTTCCAAAC ACAGTCACAA AAAATAGATC TGATACAAAA TTATGTAACG TATTATTCAA AGTAATATAG 001360
001361 TTGTCTAATA ATAATATATT GTATGTGCAT ATGTGCTGTA TGTACTCATT TTCCCTCTAT AGTTTTCTAA GCGGTTTGCT 001440
001441 TTTTTCTAAA TGGAGAAGTG TCCTTTGGTG ACTCACAAAG ATTCACAATG AGCGAATGCT CCCTAGAGCA GGGCCAACTC 001520
001521 CTCTTGGGCC CTTGTCTTGC TAGAAGATGC TTTTCTCCTG GAGACAGGAT CGCCATCATT AGTAACTTAT CCCTACACCC 001600
001601 AATCCACAAA AGATTTTACT CTTTAAAATT TTCCAGCATA TTTTGGCAAT GGTGGAATGA CAATGTATTC ATTTTTGTCC 001680
001681 CATCTGGCAA CATTTTGGCA CCTCTTATGA AATTATTTTC TATTGGATTT GTAAAAGTGC CCCATTAGTA ACACTTCCTG 001760
001761 TAAGTGTAAA TAGGCTTTTC CATAGCTGTC CCTTCACCGA AATAGATCGG TTTTGAACCT TCCTGCCAGT ACAGAGGATG 001840
001841 TGGCCTGATG CTCCCTCACA AGACGGTGGC TGTCTCACCT TCATACTGCC CGGGCCGCTT AACTAAATTG CTCCATGGCC 001920
001921 TTGTGTAGCT ATGCTGAAGG ATGGAGAAGA GCGTCCCTTT AATGAACCCG GAGTATTTCA TTTATTAGCA AATCATCAGT 002000
002001 TGACCCAGAA AGTGGCCAGG TAATTAGTGT AAAGTTTTGC AGAGCTTTTT TATATGCACC ATCTCATTTC ATTCCCATAG 002080
002081 ACCTCTGTGG CACCTGCCTT TACCCTGGCT TGGAAAAATA GAACTTCTCC CCTTGACTAA AAGGACTTAG TCTGTGTAAA 002160
002161 GTTATGTGTT TTATCACTTT ACCCAAATAT TGTTCTTTGT AATTTTCAAC TTAACACGCT
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Predicted Small Protein

Name NONHSAT103374_smProtein_1487:1747
Length 87
Molecular weight 9865.5528
Aromaticity 0.139534883721
Instability index 63.9698837209
Isoelectric point 9.35260009766
Runs 19
Runs residual 0.081308573412
Runs probability 0.0429578184997
Amino acid sequence MSECSLEQGQLLLGPCLARRCFSPGDRIAIISNLSLHPIHKRFYSLKFSSIFWQWWNDNV
FIFVPSGNILAPLMKLFSIGFVKVPH
Secondary structure LLLLLHHHHHHLLLLLHHHHLLLLLLEEEEEELLLLLLHHHHHEELLLLLLEEHHHLLLE
EEEELLLHHHHHHHHHHLLLEEELLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLL
HHHHHHHHHHHHHHHHHHLLLLLLLL
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TTTTTTTTTTTTTTTTTTiiiiiiii