NONHSAT106940

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT106940

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2270 nt

Genomic location

chr6-:3034406..3050531

Exon number

20

Exons

3034406..3034752,3034955..3035001,3035099..3035197,3035281..3035357,3035498..3035560,3035706..3035762,3036180..3036243,3036472..3036576,3037038..3037161,3037535..3037584,3037996..3038059,3039036..3039137,3039261..3039375,3040484..3040606,3040816..3040889,3044404..3044489,3048400..3048486,3048732..3048798,3049532..3049588,3050070..3050531

Genome context

Sequence
000001 ACTTTTTCAA CTTGATAAAG AGCATCTGTG GAAAACCTAT AGCTAATATC ATACTTACCG ATGACAAAAT GCCCTTTGCT 000080
000081 GTAGGTTCTA CTCAGTGCAG TAAGCCAAGA AAAAGAACAG ATTGGAAAGG AAGAAGAAAT GTTGTCATTA GTAACAAGAG 000160
000161 ATATAATTGT CTATGTAGAA AATGCAATGG CATCTACAAA AGGCTACTAA AATAAGTGAC TGTAGCAAGT TATCAAGGTT 000240
000241 GAAATACAAA AACCAGTTGT ATTTCTATAT ACTAACAACA AATAATCAAA TTGAAATCAG TAGACAGTAT CATTTATAAA 000320
000321 CATCCAAAAT AATATGTACT TATGTATAAG TCTTACAAAA GATGTAAAAT ACATATCTAT ATACTGAAAA CTGCAAAACA 000400
000401 ATACTGAGAT AAATTTAAAA AGACTTTAAC AAATGGAGAA AGATGCCTTG TTCATGAATT GGGCTGGTGC TCATGCTGCA 000480
000481 TTTGGCTACT GGAAGTGCTA CATTGATTTT TGCCCCACAT TAATTTCAAA AATTCTCATA ACCAGTTGGT TCTATTTATA 000560
000561 TTCGTGCAAT ACACATTACC ATGAGTTCCA GCACTTTGGG AGGCCAAGGC AGGAGGATCA CTAGAGGCCA GGAGTTCAAC 000640
000641 TAGCCAGGGC AACAAAGCAA GACCCCCATC TCTCCTGAGT AGCTGGGGTT ACTGGCGCCC TCCACCACGC CGGGCTAATT 000720
000721 TTTGTATTTT TGGTAGAGAT GGGGTTTCAC CATGTTGGCC CAAAGTGCTG GGATTACAGG CGTGAGCCAC CGCGCCCGGG 000800
000801 CGAACTCCAT TGAGTTTAAA TTAGAAAAAT AAATTTAGCC TTATTAAACT TGGCTTGAGT ATTTGCATAA AGTTAGCAAG 000880
000881 AATAATTATT TTGCATATAG ACTCTTCTAC TTTTTAAATT TGGTTTTGCT GAAACTTTAT TCCATAGAGA ATCTCAAGTT 000960
000961 TTTTCTTTAT TCTAATGTTA CAATTTCCAA AGTTATTAGA AACCTGCACT CGAGAGCACC TGTTAGAGGT TGGAATTGAA 001040
001041 CAATGAGAAC ACATGGACAC AAGAAGGGGA ATAACAAACC TGCACGTTGT GCACATGTAC CCTAAAACTT AAAGTATAAT 001120
001121 AATAATAATA ATAAAGAGCA CCTGTTAGAG TTCTACAGGT GATTATAAAA CCACACACCC CTCGGGGGCA GTGCCAGTCA 001200
001201 GGGTCACGAA CCACACTTCT GCTTGGGGCA TCCTGCCTTG CAGCACACGT AGGGACTACA ATCAGAAAAG AGAGGCGAGC 001280
001281 CTTTTCCTGA CTATCTGGGC CAGTGGTGTG GGAGTGTAAG AATTTACCAA GACAGTTGTA GGTAAAGAAT GGCAGATTTA 001360
001361 TTAGATAAAG TAGGAAAATA CTTTGCCAGG GAGACAATGG GCAAGTCAGT GTTCAATTGT ATGGATTTCT ACTCCTGTTT 001440
001441 ATGATTTCCT TCCTTCTGCT CGTGTTGGGT ACGTTTCACT CTTTTTTTAT TTCTTAAGGT GTAGGCTGGT ATTATTAGTT 001520
001521 TAATTCTATT ATGGTAATAA CATATTTTGT ATGATTCCAA TTTTTCCAAA TTTGTTAAGC AGAACTCACT CATCACCAAG 001600
001601 GGAACGGCAC CAAGCCATGC ATGAGGGATC TGCCCCCCTG AGATAAATGG TTTCTAATGA GAAATCTGCA GCCATTTGAA 001680
001681 TTGTTGTTCC CCTATGGGTA TTTTCAGTTG TAAAATTTCC ATTTGCTTCT TTTTGTTTTT TTATTTTCGA GACAGTATAA 001760
001761 CTGTGACACT CAGGCTGTAT GAATACAAGC ACGTGCCACC ACACCCACCT AATTTTTTTT TTATTTTTCG TAGAGATGGG 001840
001841 TTCTCACTAT GTTACCTAGG CTGGTCTCGA ACTCCTCTTT ACTGAGACTT TCTCCTTTCT CCTGGTTTCT AGAATATTTG 001920
001921 TAAGCCCTTG GCTTGCAGCA GCCTCACTAT AGTCTCTGCC TCCAGCCTCA CATGGCCTTC CCCTCGGAGG CTTCTCTGGG 002000
002001 TCTCAAATCT CTCTCTGCTT TCTCTTATAA CAACACAGCT ACTGGGTTTA GGGTCCACCC TAGATTCAGG ATTGTCTCAT 002080
002081 CTTGAGATCC TTAACTTACT TATGCCTGCA AAGACCTTGT TTCCAAATAC GATCACATTC TCAGGTACCA AAGGTTAAGT 002160
002161 CTTGCACATG CCTTTTGAGG GGGATACAAT TCATCCCACT ACAGGGAATA ATTTACATAT GATAAAATTC AACAATTTTA 002240
002241 AGTGGCCAGG CATGGTGGCT CTCCCCTGTA
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Predicted Small Protein

Name NONHSAT106940_smProtein_68:214
Length 49
Molecular weight 5674.7289
Aromaticity 0.0833333333333
Instability index 48.1229166667
Isoelectric point 10.7655639648
Runs 9
Runs residual 0.0219298245614
Runs probability 0.0196274706079
Amino acid sequence MPFAVGSTQCSKPRKRTDWKGRRNVVISNKRYNCLCRKCNGIYKRLLK
Secondary structure LLLEELLLLLLLLLLLLLLLLLEEEEEELLLEEEEEELLLHHHHHHLL
PRMN -
PiMo -