NONHSAT107984

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT107984

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2132 nt

Genomic location

chr6-:19068774..19180711

Exon number

11

Exons

19068774..19069354,19086392..19086602,19088159..19088302,19098523..19098639,19099822..19099972,19126668..19126874,19145842..19145917,19151857..19152016,19176064..19176153,19178631..19178696,19180383..19180711

Genome context

Sequence
000001 ACTAACCAGC TGCATGACCT TAAAAAAGAT ATATCACTGG GGCTTTATTT TTCTTACCTT TAAAATGAAA AAGTTAGACT 000080
000081 ACATTTGGCG TAGTCCAAAA GTATGTTTTT CTAAAAAAGC AACAAAATCC TTTCTTCAAG CAAAATTGTA TAAGGAACAT 000160
000161 CAATATGGGG GAAAAATGAA GAAAAGCTTT TCTGATTAAC ATGCGGGAGG GGGCAGAATA ACTTTTTCAC CTTCAAGAAT 000240
000241 CCCTAATGAA TGCTGGGAGC AATAGAGCTC CTGGCATGCA CAACTGGAAA ATCTTTGGCC TGGATGATCT TTGAAGTCTT 000320
000321 TTCTATTTGG TCCAACCAGT CTCCTCCAGG AAATTTCTAA ATGACATGAA TTCATTGGAT AAGTGATAAT ATCAGATATA 000400
000401 GAAATATGAC TAAATGTGCT ATTATGAATG AGGATTGTTA TATACATATA ACCTGCTCCG AGAAAGGACT TTTTGAAAGA 000480
000481 GAAAGGTTAA GAGATCAGAG TAACTTTTGA GCTAATGAGG ACACTAGGTG ACATCAAGCC CAAACACTTT CTGAACAAGT 000560
000561 GGCTGGTCCT GAGAGGTGAT CGAGGTCACA CAACTATAAG ATATAAGCAG GAACTGAAAA ATCACATCTC CAGACTCATC 000640
000641 ACTTGGACTA GCTATGTCTC ATGATTTTCA CATATATTAT ACAGAAGAAG AGGAAATGCT CAAAGATGAT GCTTAGCTCA 000720
000721 ACTTATTTCC TTTTTGCAAT AAATAATATT CCATCATCTG GATGTACCAC AGTTTATTTA TCCATTCACT ACTGAAGATC 000800
000801 GTCTTGCTTC CAAGTTTTGA CAGTTACCAG TAAAGCTGCT GTAAACATCT ATGTGCATGT TTTTGTGTAG ATATAAGTGT 000880
000881 TCAGTTCATT TGGGTAAATA CCAAGGAGCA CAACTGCTGG ATTATATGAG ACAGGATCTC CCTATATTGT CTAGGCTGGT 000960
000961 ATAGAACTGG GCTCAAGTGA TCCACCTACC TCGACCTCAG AAAGTGGCTT TTAAATTTTG AGGCAACTCA AATATGGATG 001040
001041 ATGATTGTTT TCTCAAATTT GCTAGCATCT TTTTATAAGA TACCTGCTTG GGCATAACTA TTTGTATTCA ACTGGTAACA 001120
001121 GACTAACTTC ACTTTTGATC CTATCGGAGT AGACAGTCTG GAATGTGGTG ATACTCTGTA GCTATCAAAT CTGCAGGGCT 001200
001201 TGGCCATGGA CTTGCATATC ATTGCTGAGA GAAGTCTCAA CAGCAGCTTA AGTACTATTG AAGACCTCAA GATGACAAAT 001280
001281 TTTCTCCATC ACTTCTAAGG CTGAATTGTC ATATCCAATG TGCTTTATGA CTATGCTTTG AGAGATGGTG ATAGAAGACA 001360
001361 AATACATCGC ATCATCATCC ACTCAGTGAG AAATGGCTTT TGCAGATTTG TGCTGATGGA TCTAAGGTGT GCACCTCTGG 001440
001441 AGGCTTTGAG GTGGCTATAC TTCAGTTGTG GATAAAGAGG TGAAGAAGGA CATCTATGGT GATGCTCAGT AATATCTGCG 001520
001521 AAGAACTGTG GAGACAGACA AATAGTCAAA GGAGAATACA GATGACTTTC AGAAGAAGTG TGAACATCAA GCTGAGGAGC 001600
001601 TTTTTTGAAG AGCAGGATCT TTCTATCAAC ATGGGATAGT GGAAGATTAA AGTAGTGATG ACTACATATA GAAATACAAA 001680
001681 GTTGAAGTGA GAGACGCAAG TCTGATACTG CAAAAGAAAA ATGTAAGAAA CTTAGGACTC AACTTTATCA ATGAGTTCGT 001760
001761 TCAACTATAG AAATGTACTA GGGACTGAAT GGTGTCCCCC CAAAATTTAT ATGTCAAAGC TCTAATCCTC AATATGATGA 001840
001841 TCTCCAGAGA TGGAACTTTG GGGTGGTAAT TGGGTTTAGA TGAGGTTATG AGGATGGGGT CCTCATGAAG GGATTAGTGC 001920
001921 CCTTATAAGG AGAGGCCAGA GTGCTCACTT GTTCGCATAT GCTCTTGTAT TCTCTCTCTC TCCTCAACCC CCACCATGTG 002000
002001 AGGACACAAC AAGAAGATGG TTGTCTACAA GCCAGGAAGA GAACCTTCAC AAGGAACCAA ATCAGCGGGC ACCGTGATCA 002080
002081 CGAGACTCCC AGCCTCCAGA ACTGTGAGAA ATAAATGTCT GCTGTTGAAG CC
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Predicted Small Protein

Name NONHSAT107984_smProtein_1958:2113
Length 52
Molecular weight 5988.6725
Aromaticity 0.0392156862745
Instability index 48.6156862745
Isoelectric point 8.84283447266
Runs 6
Runs residual 0.0365948359542
Runs probability 0.0371695224637
Amino acid sequence MLLYSLSLLNPHHVRTQQEDGCLQARKRTFTRNQISGHRDHETPSLQNCEK
Secondary structure LEEEEELLLLLLLLLLLLLLLHHHHHHEEEELLLLLLLLLLLLLLLLLLLL
PRMN -
PiMo -